myRT

myRT report for GCA_009677435.1_ASM967743v1

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Seq: WKMW01000011.1 Parabacteroides distasonis strain BIOML-A11 scaffold11_size181807, whole genome shotgun sequence (181807 bp)
Overview 1 RT 1: 90338-97603 bp Neighborhood of RT #1 [90338, 97755] RVT-DGRs Prophage_tail ChtBD3 KOG3544 Peptidase_S74 Feature: gene Location: 90338-91810 bp Feature: gene Location: 92006-92200 bp Feature: gene Location: 92304-93818 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 92511-93258 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9251 1 -93258 bp Feature: gene Location: 93875-94270 bp Feature: gene Location: 94282-97755 bp Feature: domain Description: Prophage_tail Location: 94552-95716 bp Feature: domain Description: Prophage_tail Location: 94552-9571 6 bp Feature: domain Description: ChtBD3 Location: 96535-96649 bp Feature: domain Description: ChtBD3 Location: 96535-96649 bp Feature: domain Description: KOG3544 Location: 96667-96781 bp Feature: domain Description: KOG3544 Location: 96667-96781 bp Feature: domain Description: Peptidase_S74 Location: 97450-97603 bp Feature: domain Description: Peptidase_S74 Location: 97450-97603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Prophage_tail (pfam06605), ChtBD3 (smart00495), KOG3544 (KOG3544, Collagens (type IV and type XIII), and related proteins ), Peptidase_S74 (pfam13884)

Seq: WKMW01000014.1 Parabacteroides distasonis strain BIOML-A11 scaffold14_size149014, whole genome shotgun sequence (148879 bp)
Overview 1 RT 1: 59193-64064 bp Neighborhood of RT #1 [59193, 65161] Orn_aminotrans RVT-GII GIIM Cadherin-like Feature: gene Location: 59193-60401 bp Feature: domain Description: Orn_aminotrans Location: 59205-60387 bp Feature: domain Description: Orn_aminotrans Location: 592 05-60387 bp Feature: gene Location: 60415-60603 bp Feature: gene Location: 60614-62020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60956-61574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60956-61574 bp Feature: domain Description: GIIM Note: maturase Location: 61631-61850 bp Feature: domain Description: GIIM Note: maturase Location: 61631-61850 bp Feature: gene Location: 62101-62247 bp Feature: gene Location: 62519-65161 bp Feature: domain Description: Cadherin-like Location: 63896-64064 bp Feature: domain Description: Cadherin-like Location: 63896-64064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Orn_aminotrans (TIGR01885), RVT-GII, GIIM (pfam08388), Cadherin-like (pfam12733)

Seq: WKMW01000003.1 Parabacteroides distasonis strain BIOML-A11 scaffold3_size333296, whole genome shotgun sequence (333296 bp)
Overview 1 RT 1: 211914-216492 bp Neighborhood of RT #1 [211914, 216698] COG3943 RVT-Retrons HTH_17 DUF3987 Feature: gene Location: 211914-212276 bp Feature: domain Description: COG3943 Location: 211953-212208 bp Feature: domain Description: COG3 943 Location: 211953 -212208 bp Feature: gene Location: 212459-213346 bp Feature: gene Location: 213393-214244 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 213558-214080 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 213 558-214080 bp Feature: gene Location: 214945-215310 bp Feature: domain Description: HTH_17 Location: 215080-215218 bp Feature: domain Description: HTH_17 Location: 215080-215218 bp Feature: gene Location: 215322-216698 bp Feature: domain Description: DUF3987 Location: 215472-216492 bp Feature: domain Description: DUF3 987 Location: 215472-216492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3943 (Uncharacterized conserved protein ), RVT-Retrons, HTH_17 (pfam12728), DUF3987 (pfam13148)

Seq: WKMW01000007.1 Parabacteroides distasonis strain BIOML-A11 scaffold7_size223553, whole genome shotgun sequence (223925 bp)
Overview 1 RT 1: 111932-115369 bp Neighborhood of RT #1 [111932, 115369] RVT-DGRs Feature: gene Location: 111932-112246 bp Feature: gene Location: 112246-112623 bp Feature: gene Location: 112604-113644 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 112814-113438 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 112814 -1134 38 bp Feature: gene Location: 113641-113781 bp Feature: gene Location: 113942-115369 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs