myRT

myRT report for GCA_009677565.1_ASM967756v1

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Seq: WKNJ01000023.1 Odoribacter splanchnicus strain BIOML-A8 scaffold23_size25869, whole genome shotgun sequence (25869 bp)
Overview 1 RT 1: 11973-18153 bp Neighborhood of RT #1 [11973, 18153] KAP_NTPase TraG-D_C RVT_N RVT-GII GIIM Feature: gene Location: 11973-14684 bp Feature: domain Description: KAP_NTPase Location: 12177-12546 bp Feature: domain Description: KAP_NTPase Location: 1 21 77-1 2546 bp Feature: gene Location: 14816-16030 bp Feature: domain Description: TraG-D_C Location: 15398-15728 bp Feature: domain Description: TraG-D_C Location: 1 5398-1 5728 bp Feature: gene Location: 16035-17687 bp Feature: domain Description: RVT_N Location: 16089-16332 bp Feature: domain Description: RVT_N Location: 1 6089-1 6332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16377-17025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6377-1 7025 bp Feature: domain Description: GIIM Note: maturase Location: 17079-17310 bp Feature: domain Description: GIIM Note: maturase Location: 1 7079-1 731 0 bp Feature: gene Location: 17769-17942 bp Feature: gene Location: 18004-18153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KAP_NTPase (pfam07693), TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WKNJ01000031.1 Odoribacter splanchnicus strain BIOML-A8 scaffold31_size21967, whole genome shotgun sequence (21967 bp)
Overview 1 RT 1: 15357-18565 bp Neighborhood of RT #1 [15357, 18565] RVT-UG27 Feature: gene Location: 15357-15635 bp Feature: gene Location: 15665-15931 bp Feature: gene Location: 15981-17243 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 16173-16809 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 16173-16809 bp Feature: gene Location: 17236-17904 bp Feature: gene Location: 17918-18565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WKNJ01000039.1 Odoribacter splanchnicus strain BIOML-A8 scaffold39_size21153, whole genome shotgun sequence (21153 bp)
Overview 1 RT 1: 10485-15677 bp Neighborhood of RT #1 [10485, 15688] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Feature: gene Location: 10485-11423 bp Feature: domain Description: Bac_Flav_CT_G Location: 10488-11409 bp Feature: domain Description: Bac_Flav_CT_G Location: 10488-11409 bp Feature: gene Location: 11602-11751 bp Feature: gene Location: 12007-13668 bp Feature: domain Description: RVT_N Location: 12061-12304 bp Feature: domain Description: RVT_N Location: 12061-123 04 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12349-12997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 49-12997 bp Feature: domain Description: GIIM Note: maturase Location: 13051-13282 bp Feature: domain Description: GIIM Note: maturase Location: 13 051-13 282 bp Feature: gene Location: 13665-15359 bp Feature: domain Description: Bac_Flav_CT_G Location: 13785-15351 bp Feature: domain Description: Bac_Flav_CT_G Location: 13 785-153 51 bp Feature: gene Location: 15374-15688 bp Feature: domain Description: DUF3876 Location: 15428-15677 bp Feature: domain Description: DUF3 876 Location: 15428-15677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3876 (pfam12992)

Seq: WKNJ01000058.1 Odoribacter splanchnicus strain BIOML-A8 scaffold58_size18287, whole genome shotgun sequence (18287 bp)
Overview 1 RT 1: 3792-7639 bp Neighborhood of RT #1 [3792, 7785] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 3792-5207 bp Feature: gene Location: 5284-5649 bp Feature: gene Location: 5895-6905 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6105-6693 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6105-6693 bp Feature: gene Location: 6883-7290 bp Feature: gene Location: 7294-7785 bp Feature: domain Description: Phage_holin_4_1 Location: 7345-7639 bp Feature: domain Description: Phage_holin_4 _1 Location: 734 5-7639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: WKNJ01000066.1 Odoribacter splanchnicus strain BIOML-A8 scaffold66_size17392, whole genome shotgun sequence (17392 bp)
Overview 1 RT 1: 2814-6961 bp Neighborhood of RT #1 [2814, 6961] TipAS COG2369 LPD3 RVT-DGRs Feature: gene Location: 2814-4025 bp Feature: domain Description: TipAS Location: 2838-3141 bp Feature: domain Description: TipAS Location: 2838-3141 bp Feature: domain Description: COG2369 Location: 3261-3447 bp Feature: domain Description: COG2369 Location: 3261-3447 bp Feature: domain Description: LPD3 Location: 3666-3948 bp Feature: domain Description: LPD3 Location: 3666-3948 bp Feature: gene Location: 4123-4356 bp Feature: gene Location: 4732-6033 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4945-5542 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4945 -5 5 42 bp Feature: gene Location: 6030-6515 bp Feature: gene Location: 6719-6961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TipAS (pfam07739), COG2369 (Uncharacterized conserved protein, contains phage Mu gpF-like domain ), LPD3 (pfam18798), RVT-DGRs