myRT

myRT report for GCA_009677825.1_ASM967782v1

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Seq: WKMQ01000149.1 Parabacteroides distasonis strain BIOML-A18 scaffold149_size1796, whole genome shotgun sequence (1796 bp)
Overview 1 RT 1: 1-1767 bp Neighborhood of RT #1 [1, 1793] RVT-DGRs Feature: gene Location: 1-345 bp Feature: gene Location: 389-733 bp Feature: gene Location: 990-1793 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1200-1767 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 200-1 767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMQ01000001.1 Parabacteroides distasonis strain BIOML-A18 scaffold1_size302573, whole genome shotgun sequence (302573 bp)
Overview 1 RT 1: 79526-84636 bp 2 RT 2: 188355-193463 bp Neighborhood of RT #1 [79526, 84636] DDE_Tnp_1 COG1373 RVT-AbiP2 Hypoth_Ymh Neighborhood of RT #2 [188355, 194746] RVT-DGRs terB_like terB_like Feature: gene Location: 79526-80506 bp Feature: domain Description: DDE_Tnp_1 Location: 79922-80441 bp Feature: domain Description: DDE_Tnp_1 Location: 7992 2 -80441 bp Feature: gene Location: 80640-81896 bp Feature: domain Description: COG1373 Location: 80643-81876 bp Feature: domain Description: COG1373 Location: 80643-81876 bp Feature: gene Location: 81955-83478 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 82384-82840 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 82 384-82 840 bp Feature: gene Location: 83503-84297 bp Feature: domain Description: Hypoth_Ymh Location: 83920-84274 bp Feature: domain Description: Hypoth_Ymh Location: 8392 0-842 74 bp Feature: gene Location: 84370-84636 bp Feature: gene Location: 188355-188723 bp Feature: gene Location: 188752-189012 bp Feature: gene Location: 189031-190056 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 189241-189847 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1892 41-189847 bp Feature: gene Location: 190040-190453 bp Feature: gene Location: 190640-194746 bp Feature: domain Description: terB_like Location: 192971-193103 bp Feature: domain Description: terB_like Location: 192 971-193103 bp Feature: domain Description: terB_like Location: 193172-193463 bp Feature: domain Description: terB_like Location: 193172 -193463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-AbiP2, Hypoth_Ymh (pfam09509), RVT-DGRs, terB_like (cl11965)

Seq: WKMQ01000237.1 Parabacteroides distasonis strain BIOML-A18 scaffold237_size1301, whole genome shotgun sequence (1301 bp)
Overview 1 RT 1: 294-1131 bp Neighborhood of RT #1 [294, 1298] RVT-DGRs Feature: gene Location: 294-1298 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 534-1131 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53 4-113 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMQ01000297.1 Parabacteroides distasonis strain BIOML-A18 scaffold297_size1126, whole genome shotgun sequence (1126 bp)
Overview 1 RT 1: 1-1030 bp Neighborhood of RT #1 [1, 1125] RVT-GII GIIM Feature: gene Location: 1-1125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94-742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94 -74 2 bp Feature: domain Description: GIIM Note: maturase Location: 799-1030 bp Feature: domain Description: GIIM Note: maturase Location: 799-1030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WKMQ01000346.1 Parabacteroides distasonis strain BIOML-A18 scaffold346_size1011, whole genome shotgun sequence (1011 bp)
Overview 1 RT 1: 87-798 bp Neighborhood of RT #1 [87, 995] RVT-GII Feature: gene Location: 87-995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 1-798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WKMQ01000038.1 Parabacteroides distasonis strain BIOML-A18 scaffold38_size36262, whole genome shotgun sequence (36262 bp)
Overview 1 RT 1: 23772-33234 bp Neighborhood of RT #1 [23772, 33234] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 23772-30509 bp Feature: domain Description: Laminin_G_3 Location: 25233-25311 bp Feature: domain Description: Laminin_G_3 Location: 25233-25311 bp Feature: domain Description: Laminin_G_3 Location: 25962-26388 bp Feature: domain Description: Laminin_G_3 Location: 2596 2-26 388 bp Feature: gene Location: 30754-30909 bp Feature: gene Location: 31026-32330 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31239-31833 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31239-31833 bp Feature: gene Location: 32327-32812 bp Feature: gene Location: 32992-33234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-DGRs

Seq: WKMQ01000004.1 Parabacteroides distasonis strain BIOML-A18 scaffold4_size253456, whole genome shotgun sequence (253456 bp)
Overview 1 RT 1: 123091-127040 bp Neighborhood of RT #1 [123091, 127040] RVT-DGRs Feature: gene Location: 123091-123381 bp Feature: gene Location: 123391-124752 bp Feature: gene Location: 125085-126272 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125418-126045 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125418-126045 bp Feature: gene Location: 126235-126663 bp Feature: gene Location: 126660-127040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKMQ01000057.1 Parabacteroides distasonis strain BIOML-A18 scaffold57_size7234, whole genome shotgun sequence (7234 bp)
Overview 1 RT 1: 636-3844 bp Neighborhood of RT #1 [636, 3844] RVT-UG27 Feature: gene Location: 636-914 bp Feature: gene Location: 944-1210 bp Feature: gene Location: 1260-2522 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1452-2088 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1452-208 8 bp Feature: gene Location: 2515-3183 bp Feature: gene Location: 3197-3844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WKMQ01000091.1 Parabacteroides distasonis strain BIOML-A18 scaffold91_size3015, whole genome shotgun sequence (3015 bp)
Overview 1 RT 1: 2-2885 bp Neighborhood of RT #1 [2, 2885] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2-430 bp Feature: gene Location: 569-2404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863-1685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863-1685 bp Feature: domain Description: Intron_maturas2 Location: 1844-2213 bp Feature: domain Description: Intron_maturas2 Location: 1844-2213 bp Feature: domain Description: HNHc Note: nucleases Location: 2237-2378 bp Feature: domain Description: HNHc Note: nucleases Location: 2237-2378 bp Feature: gene Location: 2724-2885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)