myRT

myRT report for GCA_009677915.1_ASM967791v1

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Seq: WKNM01000143.1 Odoribacter splanchnicus strain BIOML-A5 scaffold143_size7512, whole genome shotgun sequence (7512 bp)
Overview 1 RT 1: 782-3990 bp Neighborhood of RT #1 [782, 3990] RVT-UG27 Feature: gene Location: 782-1060 bp Feature: gene Location: 1090-1356 bp Feature: gene Location: 1406-2668 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1598-2234 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1 598-2234 bp Feature: gene Location: 2661-3329 bp Feature: gene Location: 3343-3990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: WKNM01000346.1 Odoribacter splanchnicus strain BIOML-A5 scaffold346_size4042, whole genome shotgun sequence (4042 bp)
Overview 1 RT 1: 640-4042 bp Neighborhood of RT #1 [640, 4041] Relaxase YWFCY RVT_N RVT-GII Feature: gene Location: 640-1887 bp Feature: domain Description: Relaxase Location: 832-1192 bp Feature: domain Description: Relaxase Location: 832 -1192 bp Feature: gene Location: 1918-2844 bp Feature: domain Description: YWFCY Location: 1927-2104 bp Feature: domain Description: YWFCY Location: 192 7-2 104 bp Feature: gene Location: 3481-4041 bp Feature: domain Description: RVT_N Location: 3535-3778 bp Feature: domain Description: RVT_N Location: 3535-3778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3823-4042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382 3-4042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII

Seq: WKNM01000407.1 Odoribacter splanchnicus strain BIOML-A5 scaffold407_size3542, whole genome shotgun sequence (3542 bp)
Overview 1 RT 1: 2-3539 bp Neighborhood of RT #1 [2, 3541] Bac_Flav_CT_G Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 2-595 bp Feature: domain Description: Bac_Flav_CT_G Location: 8-230 bp Feature: domain Description: Bac_Flav_CT_G Location: 8-23 0 bp Feature: domain Description: Bac_Flav_CT_G Location: 230-581 bp Feature: domain Description: Bac_Flav_CT_G Location: 23 0-581 bp Feature: gene Location: 774-923 bp Feature: gene Location: 1179-2840 bp Feature: domain Description: RVT_N Location: 1233-1476 bp Feature: domain Description: RVT_N Location: 123 3 -1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1521-2169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1521-2169 bp Feature: domain Description: GIIM Note: maturase Location: 2223-2454 bp Feature: domain Description: GIIM Note: maturase Location: 2223 -2454 bp Feature: gene Location: 2837-3541 bp Feature: domain Description: Bac_Flav_CT_G Location: 2957-3539 bp Feature: domain Description: Bac_Flav_CT_G Location: 2957-3 53 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WKNM01000501.1 Odoribacter splanchnicus strain BIOML-A5 scaffold501_size2838, whole genome shotgun sequence (2838 bp)
Overview 1 RT 1: 789-2838 bp Neighborhood of RT #1 [789, 2837] RVT-DGRs Feature: gene Location: 789-1364 bp Feature: gene Location: 1441-1806 bp Feature: gene Location: 2052-2837 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2262-2838 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2262-2838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKNM01000672.1 Odoribacter splanchnicus strain BIOML-A5 scaffold672_size2001, whole genome shotgun sequence (2001 bp)
Overview 1 RT 1: 2-2001 bp Neighborhood of RT #1 [2, 2000] RVT-GII GIIM TraG-D_C Feature: gene Location: 2-1093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -431 bp Feature: domain Description: GIIM Note: maturase Location: 485-716 bp Feature: domain Description: GIIM Note: maturase Location: 485 -716 bp Feature: gene Location: 1098-2000 bp Feature: domain Description: TraG-D_C Location: 1680-2001 bp Feature: domain Description: TraG-D_C Location: 1680-2001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)

Seq: WKNM01000077.1 Odoribacter splanchnicus strain BIOML-A5 scaffold77_size10769, whole genome shotgun sequence (10769 bp)
Overview 1 RT 1: 2885-7032 bp Neighborhood of RT #1 [2885, 7032] TipAS COG2369 LPD3 RVT-DGRs Feature: gene Location: 2885-4096 bp Feature: domain Description: TipAS Location: 2909-3212 bp Feature: domain Description: TipAS Location: 2909-3212 bp Feature: domain Description: COG2369 Location: 3332-3518 bp Feature: domain Description: COG236 9 Location: 3332-3518 bp Feature: domain Description: LPD3 Location: 3737-4019 bp Feature: domain Description: LPD3 Location: 3737-4019 bp Feature: gene Location: 4194-4427 bp Feature: gene Location: 4803-6104 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5016-5613 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5016 -56 13 bp Feature: gene Location: 6101-6586 bp Feature: gene Location: 6790-7032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TipAS (pfam07739), COG2369 (Uncharacterized conserved protein, contains phage Mu gpF-like domain ), LPD3 (pfam18798), RVT-DGRs