myRT

myRT report for GCA_009678375.1_ASM967837v1

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Seq: WKLM01000021.1 Parabacteroides goldsteinii strain BIOML-A7 scaffold30_size95869, whole genome shotgun sequence (95869 bp)
Overview 1 RT 1: 15121-20053 bp Neighborhood of RT #1 [15121, 20316] YWFCY RVT_N RVT-GII GIIM TraG-D_C DUF4326 Feature: gene Location: 15121-16044 bp Feature: domain Description: YWFCY Location: 15127-15304 bp Feature: domain Description: YWFCY Location: 1 51 27-1 5304 bp Feature: gene Location: 16382-16516 bp Feature: gene Location: 16682-18334 bp Feature: RT Description: RVT_N Location: 16736-16979 bp Feature: RT Description: RVT_N Location: 1 6736-1 6979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17024-17672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7024-1 7672 bp Feature: domain Description: GIIM Note: maturase Location: 17726-17957 bp Feature: domain Description: GIIM Note: maturase Location: 1 7726-1 7957 bp Feature: gene Location: 18339-19565 bp Feature: domain Description: TraG-D_C Location: 18921-19254 bp Feature: domain Description: TraG-D_C Location: 1 8921 -1 9254 bp Feature: gene Location: 19783-20316 bp Feature: domain Description: DUF4326 Location: 19798-20053 bp Feature: domain Description: DUF4326 Location: 1 9798-20053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), DUF4326 (pfam14216)

Seq: WKLM01000051.1 Parabacteroides goldsteinii strain BIOML-A7 scaffold350_size6735, whole genome shotgun sequence (6735 bp)
Overview 1 RT 1: 2-2110 bp Neighborhood of RT #1 [2, 2133] RVT-GII Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 2-574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266-575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 66-575 bp Feature: gene Location: 580-720 bp Feature: gene Location: 1117-2133 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1147-1396 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1147-1396 bp Feature: domain Description: Phage_int_SAM_5 Location: 1444-1753 bp Feature: domain Description: Phage_int_SAM_5 Location: 1444-1753 bp Feature: domain Description: INTN1_C_like Location: 1804-2110 bp Feature: domain Description: INTN1_C_like Location: 1804-2 110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII

Seq: WKLM01000070.1 Parabacteroides goldsteinii strain BIOML-A7 scaffold528_size2419, whole genome shotgun sequence (2419 bp)
Overview 1 RT 1: 309-1920 bp Neighborhood of RT #1 [309, 2321] RVT_N RVT-GII GIIM Feature: gene Location: 309-461 bp Feature: gene Location: 639-2321 bp Feature: RT Description: RVT_N Location: 693-936 bp Feature: RT Description: RVT_N Location: 693 -93 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981-1635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981-163 5 bp Feature: domain Description: GIIM Note: maturase Location: 1689-1920 bp Feature: domain Description: GIIM Note: maturase Location: 1689-1920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)