myRT

myRT report for GCA_009678515.1_ASM967851v1

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Seq: WKME01000002.1 Parabacteroides distasonis strain BIOML-A30 scaffold2_size503333, whole genome shotgun sequence (503333 bp)
Overview 1 RT 1: 405369-408756 bp Neighborhood of RT #1 [405369, 408756] PRK09741 RVT-DGRs Feature: gene Location: 405369-405800 bp Feature: domain Description: PRK09741 Location: 405456-405789 bp Feature: domain Description: PRK09741 Location: 405456-405789 bp Feature: gene Location: 405932-406468 bp Feature: gene Location: 406801-407988 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 407134-407761 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4071 34-407761 bp Feature: gene Location: 407951-408379 bp Feature: gene Location: 408376-408756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09741 (hypothetical protein; Provisional), RVT-DGRs

Seq: WKME01000038.1 Parabacteroides distasonis strain BIOML-A30 scaffold38_size3321, whole genome shotgun sequence (3321 bp)
Overview 1 RT 1: 24-3049 bp Neighborhood of RT #1 [24, 3180] RVT_N RVT-GII GIIM DUF4284 DUF4284 Feature: gene Location: 24-197 bp Feature: gene Location: 227-391 bp Feature: gene Location: 652-2157 bp Feature: RT Description: RVT_N Location: 712-955 bp Feature: RT Description: RVT_N Location: 712 -955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000-1648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000-1648 bp Feature: domain Description: GIIM Note: maturase Location: 1699-1933 bp Feature: domain Description: GIIM Note: maturase Location: 1699-1933 bp Feature: gene Location: 2299-3180 bp Feature: domain Description: DUF4284 Location: 2302-2662 bp Feature: domain Description: DUF42 84 Location: 2 302 -2 662 bp Feature: domain Description: DUF4284 Location: 2710-3049 bp Feature: domain Description: DUF42 84 Location: 2 710-3049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4284 (pfam14112), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WKME01000009.1 Parabacteroides distasonis strain BIOML-A30 scaffold9_size216545, whole genome shotgun sequence (216545 bp)
Overview 1 RT 1: 32001-40651 bp Neighborhood of RT #1 [32001, 41034] cNMP_binding RVT_N RVT-GII GIIM N6_Mtase COG4646 Feature: gene Location: 32001-32567 bp Feature: domain Description: cNMP_binding Location: 32088-32349 bp Feature: domain Description: cNMP_binding Location: 3 2088-3 23 49 bp Feature: gene Location: 32707-34035 bp Feature: gene Location: 33989-35656 bp Feature: RT Description: RVT_N Location: 34043-34286 bp Feature: RT Description: RVT_N Location: 3 4043 -3 4286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34331-34979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 43 3 1-3 4979 bp Feature: domain Description: GIIM Note: maturase Location: 35033-35264 bp Feature: domain Description: GIIM Note: maturase Location: 3 503 3 -3 5264 bp Feature: gene Location: 35638-35952 bp Feature: gene Location: 36313-41034 bp Feature: domain Description: N6_Mtase Location: 36625-37225 bp Feature: domain Description: N6_Mtase Location: 3 6625-3 7225 bp Feature: domain Description: COG4646 Location: 38623-40651 bp Feature: domain Description: COG4646 Location: 3 8623 -40651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cNMP_binding (pfam00027), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )