myRT

myRT report for GCA_009679585.1_ASM967958v1

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Seq: WKPS01000011.1 Flavonifractor plautii strain BIOML-A1 scaffold11_size92113, whole genome shotgun sequence (92113 bp)
Overview 1 RT 1: 37737-43468 bp Neighborhood of RT #1 [37737, 43468] DUF3751 RVT-DGRs Feature: gene Location: 37737-40070 bp Feature: domain Description: DUF3751 Location: 37740-38181 bp Feature: domain Description: DUF3751 Location: 37740-381 81 bp Feature: gene Location: 40330-40794 bp Feature: gene Location: 41248-42423 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41527-42142 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41 527-421 42 bp Feature: gene Location: 42384-43061 bp Feature: gene Location: 43181-43468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3751 (pfam12571), RVT-DGRs

Seq: WKPS01000013.1 Flavonifractor plautii strain BIOML-A1 scaffold13_size87073, whole genome shotgun sequence (87093 bp)
Overview 1 RT 1: 73165-76423 bp Neighborhood of RT #1 [73165, 76423] COG4877 RVT-DGRs ChiA1_BD ChtBD3 Feature: gene Location: 73165-73353 bp Feature: domain Description: COG4877 Location: 73171-73300 bp Feature: domain Description: COG4877 Location: 73171-73300 bp Feature: gene Location: 73357-73821 bp Feature: gene Location: 74282-75454 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 74561-75176 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 74561-75176 bp Feature: gene Location: 75415-76032 bp Feature: domain Description: ChiA1_BD Location: 75730-75859 bp Feature: domain Description: ChiA1_BD Location: 75730-75859 bp Feature: domain Description: ChtBD3 Location: 75919-76000 bp Feature: domain Description: ChtBD3 Location: 75919-76000 bp Feature: gene Location: 76022-76423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4877 (Uncharacterized protein ), RVT-DGRs, ChiA1_BD (cd12214), ChtBD3 (smart00495)

Seq: WKPS01000017.1 Flavonifractor plautii strain BIOML-A1 scaffold17_size188476, whole genome shotgun sequence (188513 bp)
Overview 1 RT 1: 145619-150477 bp Neighborhood of RT #1 [145619, 150902] RVT-DGRs Avd_like DUF3751 Feature: gene Location: 145619-146173 bp Feature: gene Location: 146170-147888 bp Feature: gene Location: 147873-148994 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 148077-148743 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 148077-148743 bp Feature: gene Location: 149376-149789 bp Feature: domain Description: Avd_like Location: 149403-149736 bp Feature: domain Description: Avd_like Location: 149403 -14973 6 bp Feature: gene Location: 150015-150902 bp Feature: domain Description: DUF3751 Location: 150030-150477 bp Feature: domain Description: DUF3 751 Location: 15003 0-150477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF3751 (pfam12571)

Seq: WKPS01000001.1 Flavonifractor plautii strain BIOML-A1 scaffold1_size187286, whole genome shotgun sequence (187286 bp)
Overview 1 RT 1: 91268-96105 bp Neighborhood of RT #1 [91268, 96105] RVT-DGRs Feature: gene Location: 91268-92275 bp Feature: gene Location: 92297-94144 bp Feature: gene Location: 94496-95656 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 94706-95315 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 94 706-95315 bp Feature: gene Location: 95604-95948 bp Feature: gene Location: 95962-96105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WKPS01000002.1 Flavonifractor plautii strain BIOML-A1 scaffold2_size399147, whole genome shotgun sequence (399147 bp)
Overview 1 RT 1: 191775-194502 bp 2 RT 2: 342890-347431 bp Neighborhood of RT #1 [191775, 194502] RVT-DGRs Neighborhood of RT #2 [342890, 347431] Avd_like RVT-DGRs FN3 FN3 Feature: gene Location: 191775-192233 bp Feature: gene Location: 192230-192532 bp Feature: gene Location: 192459-193403 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 192465-193047 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 192465 -193047 bp Feature: gene Location: 193939-194076 bp Feature: gene Location: 194110-194502 bp Feature: gene Location: 342890-343480 bp Feature: domain Description: Avd_like Location: 343097-343373 bp Feature: domain Description: Avd_like Location: 343097-343373 bp Feature: gene Location: 343516-343659 bp Feature: gene Location: 343762-345048 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 344086-344686 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 344086-344686 bp Feature: gene Location: 345072-346925 bp Feature: domain Description: FN3 Location: 345747-345966 bp Feature: domain Description: FN3 Location: 345 747-345 966 bp Feature: domain Description: FN3 Location: 346041-346311 bp Feature: domain Description: FN3 Location: 346041-346311 bp Feature: gene Location: 346952-347431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), FN3 (smart00060)

Seq: WKPS01000031.1 Flavonifractor plautii strain BIOML-A1 scaffold31_size90789, whole genome shotgun sequence (90789 bp)
Overview 1 RT 1: 51087-57240 bp Neighborhood of RT #1 [51087, 57254] TrmO TrmO_C RVT-Retrons PRK08279 FACL_like_6 ALDH_Acyl-CoA-Red_LuxC Feature: gene Location: 51087-51794 bp Feature: domain Description: TrmO Location: 51144-51513 bp Feature: domain Description: TrmO Location: 51144-51513 bp Feature: domain Description: TrmO_C Location: 51567-51729 bp Feature: domain Description: TrmO_C Location: 5156 7-51729 bp Feature: gene Location: 51832-53427 bp Feature: gene Location: 53444-54577 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53768-54314 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5376 8-54314 bp Feature: gene Location: 54660-56093 bp Feature: domain Description: PRK08279 Location: 54687-54948 bp Feature: domain Description: PRK08279 Location: 546 87-54948 bp Feature: domain Description: FACL_like_6 Location: 55032-56082 bp Feature: domain Description: FACL_like_6 Location: 55032-56 082 bp Feature: gene Location: 56103-57254 bp Feature: domain Description: ALDH_Acyl-CoA-Red_LuxC Location: 56286-57240 bp Feature: domain Description: ALDH_Acyl-CoA-Red_LuxC Location: 56 286 -57240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrmO, TrmO_C (pfam18389), RVT-Retrons, PRK08279 (long-chain-acyl-CoA synthetase; Validated), FACL_like_6 (cd05922), ALDH_Acyl-CoA-Red_LuxC (cd07080)

Seq: WKPS01000003.1 Flavonifractor plautii strain BIOML-A1 scaffold3_size133458, whole genome shotgun sequence (133458 bp)
Overview 1 RT 1: 106666-110908 bp Neighborhood of RT #1 [106666, 110943] Avd_like RVT-DGRs ChiA1_BD ChiA1_BD Feature: gene Location: 106666-107085 bp Feature: domain Description: Avd_like Location: 106711-107035 bp Feature: domain Description: Avd_like Location: 1067 11-107 035 bp Feature: gene Location: 107101-107343 bp Feature: gene Location: 107415-108521 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 107616-108222 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 107 616-108222 bp Feature: gene Location: 108463-110160 bp Feature: gene Location: 110173-110943 bp Feature: domain Description: ChiA1_BD Location: 110455-110530 bp Feature: domain Description: ChiA1_BD Location: 110455-110530 bp Feature: domain Description: ChiA1_BD Location: 110809-110908 bp Feature: domain Description: ChiA1_BD Location: 110809-110908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, ChiA1_BD (cd12214)

Seq: WKPS01000044.1 Flavonifractor plautii strain BIOML-A1 scaffold44_size49003, whole genome shotgun sequence (49003 bp)
Overview 1 RT 1: 37663-40883 bp Neighborhood of RT #1 [37663, 40930] RVT-DGRs COG4877 Feature: gene Location: 37663-38067 bp Feature: gene Location: 38067-38714 bp Feature: gene Location: 38711-39970 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39074-39692 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39074-39692 bp Feature: gene Location: 40287-40745 bp Feature: gene Location: 40748-40930 bp Feature: domain Description: COG4877 Location: 40754-40883 bp Feature: domain Description: COG48 77 Location: 40754-408 8 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, COG4877 (Uncharacterized protein )

Seq: WKPS01000067.1 Flavonifractor plautii strain BIOML-A1 scaffold67_size15235, whole genome shotgun sequence (15235 bp)
Overview 1 RT 1: 1622-5313 bp Neighborhood of RT #1 [1622, 5315] TnpV YozG RVT-GII HNHc Maff2 Feature: gene Location: 1622-1999 bp Feature: domain Description: TnpV Location: 1667-1991 bp Feature: domain Description: TnpV Location: 1667-19 9 1 bp Feature: gene Location: 1959-2321 bp Feature: domain Description: YozG Location: 2058-2259 bp Feature: domain Description: YozG Location: 2058-2259 bp Feature: gene Location: 2578-4464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2911-3649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29 11-3649 bp Feature: domain Description: HNHc Note: nucleases Location: 4198-4348 bp Feature: domain Description: HNHc Note: nucleases Location: 419 8-4348 bp Feature: gene Location: 4507-4767 bp Feature: gene Location: 5184-5315 bp Feature: domain Description: Maff2 Location: 5187-5313 bp Feature: domain Description: Maff2 Location: 5187-5313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpV (pfam14198), YozG (COG3655), RVT-GII, HNHc (smart00507), Maff2 (pfam12750)

Seq: WKPS01000092.1 Flavonifractor plautii strain BIOML-A1 scaffold92_size2508, whole genome shotgun sequence (2508 bp)
Overview 1 RT 1: 3-2064 bp Neighborhood of RT #1 [3, 2399] RVT-GII Intron_maturas2 Feature: gene Location: 3-215 bp Feature: gene Location: 287-415 bp Feature: gene Location: 588-2399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1686 bp Feature: domain Description: Intron_maturas2 Location: 1755-2064 bp Feature: domain Description: Intron_maturas2 Location: 1755-2064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)