myRT

myRT report for GCA_009679755.1_ASM967975v1

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Seq: WKPV01000012.1 Faecalibacterium prausnitzii strain BIOML-B18 scaffold12_size110401, whole genome shotgun sequence (110200 bp)
Overview 1 RT 1: 31907-35836 bp Neighborhood of RT #1 [31907, 35836] ZnMc_MMP_like RVT-GII GIIM quorum_AgrD Feature: gene Location: 31907-32428 bp Feature: domain Description: ZnMc_MMP_like Location: 32066-32372 bp Feature: domain Description: ZnMc_MMP_like Location: 32066-32372 bp Feature: gene Location: 32444-33115 bp Feature: gene Location: 33626-35020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33944-34568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33944-34568 bp Feature: domain Description: GIIM Note: maturase Location: 34625-34847 bp Feature: domain Description: GIIM Note: maturase Location: 34625-34847 bp Feature: gene Location: 35243-35398 bp Feature: domain Description: quorum_AgrD Location: 35288-35393 bp Feature: domain Description: quorum_AgrD Location: 35288-35393 bp Feature: gene Location: 35417-35836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ZnMc_MMP_like (cd04268), RVT-GII, GIIM (pfam08388), quorum_AgrD (TIGR04223)

Seq: WKPV01000028.1 Faecalibacterium prausnitzii strain BIOML-B18 scaffold28_size17572, whole genome shotgun sequence (17482 bp)
Overview 1 RT 1: 12514-17145 bp Neighborhood of RT #1 [12514, 17145] Spr TraC-F-type RVT_N RVT-GII GIIM Feature: gene Location: 12514-14160 bp Feature: domain Description: Spr Location: 13807-14140 bp Feature: domain Description: Spr Location: 13807-14140 bp Feature: gene Location: 14244-15248 bp Feature: domain Description: TraC-F-type Location: 14328-15054 bp Feature: domain Description: TraC-F-type Location: 1432 8-15054 bp Feature: gene Location: 15253-16935 bp Feature: domain Description: RVT_N Location: 15331-15574 bp Feature: domain Description: RVT_N Location: 15331-15574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15619-16282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15619-162 82 bp Feature: domain Description: GIIM Note: maturase Location: 16333-16570 bp Feature: domain Description: GIIM Note: maturase Location: 16333-16570 bp Feature: gene Location: 17014-17145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spr (COG0791), TraC-F-type (TIGR02746), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WKPV01000002.1 Faecalibacterium prausnitzii strain BIOML-B18 scaffold2_size495535, whole genome shotgun sequence (494745 bp)
Overview 1 RT 1: 448452-452359 bp Neighborhood of RT #1 [448452, 452359] Avd_like RVT-DGRs Feature: gene Location: 448452-449027 bp Feature: domain Description: Avd_like Location: 448659-448929 bp Feature: domain Description: Avd_like Location: 448659-448929 bp Feature: gene Location: 449070-449222 bp Feature: gene Location: 449369-450598 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 449603-450218 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 449603 -450218 bp Feature: gene Location: 450619-451878 bp Feature: gene Location: 451889-452359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: WKPV01000003.1 Faecalibacterium prausnitzii strain BIOML-B18 scaffold3_size315476, whole genome shotgun sequence (314990 bp)
Overview 1 RT 1: 49913-59152 bp Neighborhood of RT #1 [49913, 59157] TIGR02687 Lon_rel_chp RVT-UG5 nitrilase YfeH Feature: gene Location: 49913-52510 bp Feature: domain Description: TIGR02687 Location: 49973-52469 bp Feature: domain Description: TIGR02687 Location: 4 9973-524 69 bp Feature: gene Location: 52531-54648 bp Feature: domain Description: Lon_rel_chp Location: 52567-54643 bp Feature: domain Description: Lon_rel_chp Location: 52567-54 64 3 bp Feature: gene Location: 54795-57950 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 55293-55761 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 55293-55761 bp Feature: domain Description: nitrilase Location: 57066-57810 bp Feature: domain Description: nitrilase Location: 57066-57810 bp Feature: gene Location: 57991-58194 bp Feature: gene Location: 58213-59157 bp Feature: domain Description: YfeH Location: 58219-59152 bp Feature: domain Description: YfeH Location: 58219-59152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), Lon_rel_chp (TIGR02653), RVT-UG5, nitrilase (cl11424), YfeH (COG0385)