myRT

myRT report for GCA_009679775.1_ASM967977v1

Download annotations/find similar RTs

Seq: WKPW01000001.1 Faecalibacterium prausnitzii strain BIOML-B17 scaffold1_size410402, whole genome shotgun sequence (410222 bp)
Overview 1 RT 1: 255834-265037 bp Neighborhood of RT #1 [255834, 265078] YfeH RVT-UG5 nitrilase Lon_rel_chp TIGR02687 Feature: gene Location: 255834-256778 bp Feature: domain Description: YfeH Location: 255840-256773 bp Feature: domain Description: YfeH Location: 255840-256773 bp Feature: gene Location: 256797-257000 bp Feature: gene Location: 257041-260196 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 257539-258007 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 257539-258007 bp Feature: domain Description: nitrilase Location: 259312-260056 bp Feature: domain Description: nitrilase Location: 25931 2-260056 bp Feature: gene Location: 260343-262460 bp Feature: domain Description: Lon_rel_chp Location: 260379-262455 bp Feature: domain Description: Lon_rel_chp Location: 260379-262455 bp Feature: gene Location: 262481-265078 bp Feature: domain Description: TIGR02687 Location: 262541-265037 bp Feature: domain Description: TIGR02687 Location: 262541 -265037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfeH (COG0385), RVT-UG5, nitrilase (cl11424), Lon_rel_chp (TIGR02653), TIGR02687 (TIGR02687 family protein)

Seq: WKPW01000027.1 Faecalibacterium prausnitzii strain BIOML-B17 scaffold27_size24045, whole genome shotgun sequence (24045 bp)
Overview 1 RT 1: 9276-13183 bp Neighborhood of RT #1 [9276, 13183] Avd_like RVT-DGRs Feature: gene Location: 9276-9851 bp Feature: domain Description: Avd_like Location: 9483-9753 bp Feature: domain Description: Avd_like Location: 9483-9753 bp Feature: gene Location: 9894-10046 bp Feature: gene Location: 10193-11422 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10427-11042 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1042 7-11042 bp Feature: gene Location: 11443-12702 bp Feature: gene Location: 12713-13183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: WKPW01000048.1 Faecalibacterium prausnitzii strain BIOML-B17 scaffold48_size2320, whole genome shotgun sequence (2320 bp)
Overview 1 RT 1: 88-1980 bp Neighborhood of RT #1 [88, 1980] RVT_N RVT-GII GIIM Feature: gene Location: 88-1770 bp Feature: domain Description: RVT_N Location: 166-409 bp Feature: domain Description: RVT_N Location: 166-409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454-1117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454-1117 bp Feature: domain Description: GIIM Note: maturase Location: 1168-1405 bp Feature: domain Description: GIIM Note: maturase Location: 1168-1405 bp Feature: gene Location: 1849-1980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)