myRT

myRT report for GCA_009679805.1_ASM967980v1

Download annotations/find similar RTs

Seq: WKPY01000125.1 Faecalibacterium prausnitzii strain BIOML-B15 scaffold125_size2341, whole genome shotgun sequence (2341 bp)
Overview 1 RT 1: 1-1910 bp Neighborhood of RT #1 [1, 2245] RVT-GII Intron_maturas2 Feature: gene Location: 1-333 bp Feature: gene Location: 434-2245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 698-1 532 bp Feature: domain Description: Intron_maturas2 Location: 1601-1910 bp Feature: domain Description: Intron_maturas2 Location: 1 601 -1 91 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: WKPY01000126.1 Faecalibacterium prausnitzii strain BIOML-B15 scaffold126_size2318, whole genome shotgun sequence (2318 bp)
Overview 1 RT 1: 89-1981 bp Neighborhood of RT #1 [89, 1981] RVT_N RVT-GII GIIM Feature: gene Location: 89-1771 bp Feature: domain Description: RVT_N Location: 167-410 bp Feature: domain Description: RVT_N Location: 167-410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1118 bp Feature: domain Description: GIIM Note: maturase Location: 1169-1406 bp Feature: domain Description: GIIM Note: maturase Location: 1169-1406 bp Feature: gene Location: 1850-1981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WKPY01000298.1 Faecalibacterium prausnitzii strain BIOML-B15 scaffold298_size1183, whole genome shotgun sequence (1183 bp)
Overview 1 RT 1: 2-539 bp Neighborhood of RT #1 [2, 1180] RVT-UG5 Feature: gene Location: 2-1180 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 71-539 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 71-53 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5

Seq: WKPY01000035.1 Faecalibacterium prausnitzii strain BIOML-B15 scaffold35_size24018, whole genome shotgun sequence (24018 bp)
Overview 1 RT 1: 9270-13177 bp Neighborhood of RT #1 [9270, 13177] Avd_like RVT-DGRs Feature: gene Location: 9270-9845 bp Feature: domain Description: Avd_like Location: 9477-9747 bp Feature: domain Description: Avd_like Location: 94 77-974 7 bp Feature: gene Location: 9888-10040 bp Feature: gene Location: 10187-11416 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10421-11036 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 104 21-11036 bp Feature: gene Location: 11437-12696 bp Feature: gene Location: 12707-13177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: WKPY01000097.1 Faecalibacterium prausnitzii strain BIOML-B15 scaffold97_size3647, whole genome shotgun sequence (3647 bp)
Overview 1 RT 1: 1204-3123 bp Neighborhood of RT #1 [1204, 3644] HTH_38 RVT-DGRs FlgJ Feature: gene Location: 1204-1482 bp Feature: domain Description: HTH_38 Location: 1219-1345 bp Feature: domain Description: HTH_38 Location: 1219-1345 bp Feature: gene Location: 1699-2196 bp Feature: gene Location: 2210-2632 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2216-2546 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2216-25 46 bp Feature: gene Location: 2646-3644 bp Feature: domain Description: FlgJ Location: 2652-3123 bp Feature: domain Description: FlgJ Location: 265 2-3123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), RVT-DGRs, FlgJ (COG1705)