myRT

myRT report for GCA_009679815.1_ASM967981v1

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Seq: WKPX01000025.1 Faecalibacterium prausnitzii strain BIOML-B16 scaffold25_size40509, whole genome shotgun sequence (40509 bp)
Overview 1 RT 1: 17889-25805 bp Neighborhood of RT #1 [17889, 25810] TIGR02687 Lon_rel_chp RVT-UG5 nitrilase YfeH Feature: gene Location: 17889-19163 bp Feature: domain Description: TIGR02687 Location: 17907-19122 bp Feature: domain Description: TIGR02687 Location: 1 7907-1 91 22 bp Feature: gene Location: 19184-21301 bp Feature: domain Description: Lon_rel_chp Location: 19220-21296 bp Feature: domain Description: Lon_rel_chp Location: 1 9220-21 296 bp Feature: gene Location: 21448-24603 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21946-22414 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21 946-2241 4 bp Feature: domain Description: nitrilase Location: 23719-24463 bp Feature: domain Description: nitrilase Location: 2371 9-24463 bp Feature: gene Location: 24644-24847 bp Feature: gene Location: 24866-25810 bp Feature: domain Description: YfeH Location: 24872-25805 bp Feature: domain Description: YfeH Location: 24872-25805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), Lon_rel_chp (TIGR02653), RVT-UG5, nitrilase (cl11424), YfeH (COG0385)

Seq: WKPX01000043.1 Faecalibacterium prausnitzii strain BIOML-B16 scaffold43_size24019, whole genome shotgun sequence (24019 bp)
Overview 1 RT 1: 9272-13179 bp Neighborhood of RT #1 [9272, 13179] Avd_like RVT-DGRs Feature: gene Location: 9272-9847 bp Feature: domain Description: Avd_like Location: 9479-9749 bp Feature: domain Description: Avd_like Location: 9479-9749 bp Feature: gene Location: 9890-10042 bp Feature: gene Location: 10189-11418 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 10423-11038 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1042 3-11038 bp Feature: gene Location: 11439-12698 bp Feature: gene Location: 12709-13179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: WKPX01000175.1 Faecalibacterium prausnitzii strain BIOML-B16 scaffold763_size2318, whole genome shotgun sequence (2318 bp)
Overview 1 RT 1: 2-1865 bp Neighborhood of RT #1 [2, 2230] RVT_N RVT-GII GIIM Feature: gene Location: 2-136 bp Feature: gene Location: 255-428 bp Feature: gene Location: 548-2230 bp Feature: domain Description: RVT_N Location: 626-869 bp Feature: domain Description: RVT_N Location: 626-869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1577 bp Feature: domain Description: GIIM Note: maturase Location: 1628-1865 bp Feature: domain Description: GIIM Note: maturase Location: 1628-1865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)