myRT

myRT report for GCA_009679915.1_ASM967991v1

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Seq: WKQE01000016.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold16_size71261, whole genome shotgun sequence (71175 bp)
Overview 1 RT 1: 2-3294 bp Neighborhood of RT #1 [2, 3437] RVT-GII Intron_maturas2 HNHc LPD26 SpoVG Feature: gene Location: 2-130 bp Feature: gene Location: 552-2375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-1638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-1 638 bp Feature: domain Description: Intron_maturas2 Location: 1710-2025 bp Feature: domain Description: Intron_maturas2 Location: 1 71 0-2025 bp Feature: domain Description: HNHc Note: nucleases Location: 2172-2346 bp Feature: domain Description: HNHc Note: nucleases Location: 21 72-2346 bp Feature: gene Location: 2451-2753 bp Feature: gene Location: 2796-3437 bp Feature: domain Description: LPD26 Location: 2826-2991 bp Feature: domain Description: LPD26 Location: 2826-2991 bp Feature: domain Description: SpoVG Location: 3063-3294 bp Feature: domain Description: SpoVG Location: 3063-3294 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WKQE01000001.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold1_size444815, whole genome shotgun sequence (444815 bp)
Overview 1 RT 1: 338860-342621 bp Neighborhood of RT #1 [338860, 342632] DUF3751 RVT-DGRs Phage_XkdX Feature: gene Location: 338860-339411 bp Feature: domain Description: DUF3751 Location: 338884-339316 bp Feature: domain Description: DUF3751 Location: 338884-339316 bp Feature: gene Location: 339411-340658 bp Feature: gene Location: 341103-342257 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 341346-341967 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 341346-341967 bp Feature: gene Location: 342217-342480 bp Feature: gene Location: 342483-342632 bp Feature: domain Description: Phage_XkdX Location: 342519-342621 bp Feature: domain Description: Phage_XkdX Location: 342 519-342 62 1 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WKQE01000027.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold27_size32118, whole genome shotgun sequence (32118 bp)
Overview 1 RT 1: 25048-28692 bp Neighborhood of RT #1 [25048, 28692] Avd_like RVT-DGRs Feature: gene Location: 25048-25623 bp Feature: domain Description: Avd_like Location: 25255-25525 bp Feature: domain Description: Avd_like Location: 25255-25525 bp Feature: gene Location: 25666-25818 bp Feature: gene Location: 25965-27194 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26199-26814 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 26199-26814 bp Feature: gene Location: 27215-28474 bp Feature: gene Location: 28489-28692 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WKQE01000002.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold2_size298697, whole genome shotgun sequence (298883 bp)
Overview 1 RT 1: 46793-50908 bp Neighborhood of RT #1 [46793, 50908] RVT-DGRs bZIP_CREB1 Feature: gene Location: 46793-48532 bp Feature: gene Location: 48610-48741 bp Feature: gene Location: 48975-50213 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49269-49860 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 9269-4 9860 bp Feature: gene Location: 50210-50596 bp Feature: domain Description: bZIP_CREB1 Location: 50465-50549 bp Feature: domain Description: bZIP_CREB1 Location: 504 65-5054 9 bp Feature: gene Location: 50735-50908 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WKQE01000055.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold55_size3057, whole genome shotgun sequence (3057 bp)
Overview 1 RT 1: 3-2990 bp Neighborhood of RT #1 [3, 3055] RVT-GII T4SS-DNA_transf Feature: gene Location: 3-188 bp Feature: gene Location: 208-2118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 38-1282 bp Feature: gene Location: 2744-3055 bp Feature: domain Description: T4SS-DNA_transf Location: 2825-2990 bp Feature: domain Description: T4SS-DNA_transf Location: 2825 -2990 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WKQE01000059.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold59_size4430, whole genome shotgun sequence (4127 bp)
Overview 1 RT 1: 85-3410 bp Neighborhood of RT #1 [85, 3424] RVT_N RVT-GII GIIM COG4646 KOG0390 Feature: gene Location: 85-1776 bp Feature: RT Description: RVT_N Location: 130-373 bp Feature: RT Description: RVT_N Location: 130-373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-1066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418-106 6 bp Feature: domain Description: GIIM Note: maturase Location: 1126-1354 bp Feature: domain Description: GIIM Note: maturase Location: 1126 -1354 bp Feature: gene Location: 1834-2019 bp Feature: gene Location: 2366-3424 bp Feature: domain Description: COG4646 Location: 2369-2930 bp Feature: domain Description: COG46 46 Location: 236 9-2930 bp Feature: domain Description: KOG0390 Location: 3197-3410 bp Feature: domain Description: KOG0390 Location: 3197-3410 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WKQE01000060.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold60_size21946, whole genome shotgun sequence (20019 bp)
Overview 1 RT 1: 1-2202 bp Neighborhood of RT #1 [1, 2351] RVT-GII Intron_maturas2 HNHc SpoVG Feature: gene Location: 1-1482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 -7 45 bp Feature: domain Description: Intron_maturas2 Location: 817-1132 bp Feature: domain Description: Intron_maturas2 Location: 817 -1132 bp Feature: domain Description: HNHc Note: nucleases Location: 1279-1453 bp Feature: domain Description: HNHc Note: nucleases Location: 127 9-1453 bp Feature: gene Location: 1558-1860 bp Feature: gene Location: 1899-2351 bp Feature: domain Description: SpoVG Location: 1971-2202 bp Feature: domain Description: SpoVG Location: 197 1-2202 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WKQE01000064.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold64_size2236, whole genome shotgun sequence (2236 bp)
Overview 1 RT 1: 720-1758 bp Neighborhood of RT #1 [720, 2234] RVT-GII Feature: gene Location: 720-2234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1044-1758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1044-1758 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WKQE01000082.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold82_size1114, whole genome shotgun sequence (1114 bp)
Overview 1 RT 1: 86-1082 bp Neighborhood of RT #1 [86, 1111] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 86-1111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173-392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173-39 2 bp Feature: domain Description: Intron_maturas2 Location: 461-737 bp Feature: domain Description: Intron_maturas2 Location: 461-737 bp Feature: domain Description: HNHc Note: nucleases Location: 929-1082 bp Feature: domain Description: HNHc Note: nucleases Location: 9 29 -1082 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: WKQE01000085.1 Faecalibacterium prausnitzii strain BIOML-B9 scaffold85_size1052, whole genome shotgun sequence (1052 bp)
Overview 1 RT 1: 598-1045 bp Neighborhood of RT #1 [598, 1050] RVT-GII Feature: gene Location: 598-1050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 865-1045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 865-10 45 bp Sorry, your browser does not support inline SVG.
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