myRT

myRT report for GCA_009680015.1_ASM968001v1

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Seq: WKQJ01000015.1 Faecalibacterium prausnitzii strain BIOML-B4 scaffold15_size82804, whole genome shotgun sequence (82804 bp)
Overview 1 RT 1: 65718-69625 bp Neighborhood of RT #1 [65718, 69625] Avd_like RVT-DGRs Feature: gene Location: 65718-66293 bp Feature: domain Description: Avd_like Location: 65925-66195 bp Feature: domain Description: Avd_like Location: 65925-661 95 bp Feature: gene Location: 66336-66488 bp Feature: gene Location: 66635-67864 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 66869-67484 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 66869-67484 bp Feature: gene Location: 67885-69144 bp Feature: gene Location: 69155-69625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: WKQJ01000046.1 Faecalibacterium prausnitzii strain BIOML-B4 scaffold46_size11617, whole genome shotgun sequence (11617 bp)
Overview 1 RT 1: 3-4860 bp Neighborhood of RT #1 [3, 4934] TraC-F-type RVT_N RVT-GII GIIM TraC-F-type Feature: gene Location: 3-254 bp Feature: gene Location: 247-1254 bp Feature: domain Description: TraC-F-type Location: 331-1057 bp Feature: domain Description: TraC-F-type Location: 331-1057 bp Feature: gene Location: 1259-2941 bp Feature: domain Description: RVT_N Location: 1337-1580 bp Feature: domain Description: RVT_N Location: 1337-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1625-2288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 5-2 2 88 bp Feature: domain Description: GIIM Note: maturase Location: 2339-2576 bp Feature: domain Description: GIIM Note: maturase Location: 2 339-2 576 bp Feature: gene Location: 3020-3151 bp Feature: gene Location: 3468-4934 bp Feature: domain Description: TraC-F-type Location: 3915-4860 bp Feature: domain Description: TraC-F-type Location: 3915-4860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WKQJ01000004.1 Faecalibacterium prausnitzii strain BIOML-B4 scaffold4_size140891, whole genome shotgun sequence (140891 bp)
Overview 1 RT 1: 92096-101299 bp Neighborhood of RT #1 [92096, 101340] YfeH RVT-UG5 nitrilase Lon_rel_chp TIGR02687 Feature: gene Location: 92096-93040 bp Feature: domain Description: YfeH Location: 92102-93035 bp Feature: domain Description: YfeH Location: 92102-93 03 5 bp Feature: gene Location: 93059-93262 bp Feature: gene Location: 93303-96458 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 93801-94269 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 93 801-94269 bp Feature: domain Description: nitrilase Location: 95574-96318 bp Feature: domain Description: nitrilase Location: 95574-963 18 bp Feature: gene Location: 96605-98722 bp Feature: domain Description: Lon_rel_chp Location: 96641-98717 bp Feature: domain Description: Lon_rel_chp Location: 96641-98717 bp Feature: gene Location: 98743-101340 bp Feature: domain Description: TIGR02687 Location: 98803-101299 bp Feature: domain Description: TIGR02687 Location: 98803 -101299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfeH (COG0385), RVT-UG5, nitrilase (cl11424), Lon_rel_chp (TIGR02653), TIGR02687 (TIGR02687 family protein)