myRT

myRT report for GCA_009680055.1_ASM968005v1

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Seq: WKQL01000016.1 Faecalibacterium prausnitzii strain BIOML-B2 scaffold16_size79481, whole genome shotgun sequence (79481 bp)
Overview 1 RT 1: 64712-68619 bp Neighborhood of RT #1 [64712, 68619] Avd_like RVT-DGRs Feature: gene Location: 64712-65287 bp Feature: domain Description: Avd_like Location: 64919-65189 bp Feature: domain Description: Avd_like Location: 6491 9-651 89 bp Feature: gene Location: 65330-65482 bp Feature: gene Location: 65629-66858 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65863-66478 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65863-66478 bp Feature: gene Location: 66879-68138 bp Feature: gene Location: 68149-68619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: WKQL01000018.1 Faecalibacterium prausnitzii strain BIOML-B2 scaffold18_size89803, whole genome shotgun sequence (89812 bp)
Overview 1 RT 1: 73485-77762 bp Neighborhood of RT #1 [73485, 77762] ABC2_membrane_2 RVT-GII GIIM Feature: gene Location: 73485-74315 bp Feature: domain Description: ABC2_membrane_2 Location: 73656-74169 bp Feature: domain Description: ABC2 _membrane_2 Location: 73656-74169 bp Feature: gene Location: 74370-74789 bp Feature: gene Location: 75186-76580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75504-76128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75504-7612 8 bp Feature: domain Description: GIIM Note: maturase Location: 76185-76407 bp Feature: domain Description: GIIM Note: maturase Location: 76185-76407 bp Feature: gene Location: 76932-77087 bp Feature: gene Location: 77091-77762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC2_membrane_2 (pfam12679), RVT-GII, GIIM (pfam08388)

Seq: WKQL01000005.1 Faecalibacterium prausnitzii strain BIOML-B2 scaffold5_size142887, whole genome shotgun sequence (143020 bp)
Overview 1 RT 1: 94259-103462 bp Neighborhood of RT #1 [94259, 103503] YfeH RVT-UG5 nitrilase Lon_rel_chp TIGR02687 Feature: gene Location: 94259-95203 bp Feature: domain Description: YfeH Location: 94265-95198 bp Feature: domain Description: YfeH Location: 94265-95198 bp Feature: gene Location: 95222-95425 bp Feature: gene Location: 95466-98621 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 95964-96432 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 95964-9643 2 bp Feature: domain Description: nitrilase Location: 97737-98481 bp Feature: domain Description: nitrilase Location: 9773 7-98481 bp Feature: gene Location: 98768-100885 bp Feature: domain Description: Lon_rel_chp Location: 98804-100880 bp Feature: domain Description: Lon_rel_chp Location: 98804-100880 bp Feature: gene Location: 100906-103503 bp Feature: domain Description: TIGR02687 Location: 100966-103462 bp Feature: domain Description: TIGR02687 Location: 100966-103 462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfeH (COG0385), RVT-UG5, nitrilase (cl11424), Lon_rel_chp (TIGR02653), TIGR02687 (TIGR02687 family protein)

Seq: WKQL01000061.1 Faecalibacterium prausnitzii strain BIOML-B2 scaffold61_size2318, whole genome shotgun sequence (2318 bp)
Overview 1 RT 1: 89-1981 bp Neighborhood of RT #1 [89, 1981] RVT_N RVT-GII GIIM Feature: gene Location: 89-1771 bp Feature: domain Description: RVT_N Location: 167-410 bp Feature: domain Description: RVT_N Location: 167-4 10 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 55-1118 bp Feature: domain Description: GIIM Note: maturase Location: 1169-1406 bp Feature: domain Description: GIIM Note: maturase Location: 1169-14 06 bp Feature: gene Location: 1850-1981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)