myRT

myRT report for GCA_009680075.1_ASM968007v1

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Seq: WKQK01000015.1 Faecalibacterium prausnitzii strain BIOML-B3 scaffold15_size79121, whole genome shotgun sequence (79121 bp)
Overview 1 RT 1: 64352-68259 bp Neighborhood of RT #1 [64352, 68259] Avd_like RVT-DGRs Feature: gene Location: 64352-64927 bp Feature: domain Description: Avd_like Location: 64559-64829 bp Feature: domain Description: Avd_like Location: 64559-64829 bp Feature: gene Location: 64970-65122 bp Feature: gene Location: 65269-66498 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65503-66118 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 65503-661 1 8 bp Feature: gene Location: 66519-67778 bp Feature: gene Location: 67789-68259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: WKQK01000038.1 Faecalibacterium prausnitzii strain BIOML-B3 scaffold38_size14862, whole genome shotgun sequence (14862 bp)
Overview 1 RT 1: 12051-14860 bp Neighborhood of RT #1 [12051, 14860] RVT-GII GIIM Feature: gene Location: 12051-12722 bp Feature: gene Location: 12883-13125 bp Feature: gene Location: 13233-14627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13551-14175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13551-14175 bp Feature: domain Description: GIIM Note: maturase Location: 14232-14454 bp Feature: domain Description: GIIM Note: maturase Location: 142 32 -14454 bp Feature: gene Location: 14723-14860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WKQK01000004.1 Faecalibacterium prausnitzii strain BIOML-B3 scaffold4_size140692, whole genome shotgun sequence (140692 bp)
Overview 1 RT 1: 91931-101134 bp Neighborhood of RT #1 [91931, 101175] YfeH RVT-UG5 nitrilase Lon_rel_chp TIGR02687 Feature: gene Location: 91931-92875 bp Feature: domain Description: YfeH Location: 91937-92870 bp Feature: domain Description: YfeH Location: 9193 7-92870 bp Feature: gene Location: 92894-93097 bp Feature: gene Location: 93138-96293 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 93636-94104 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 93 63 6-94104 bp Feature: domain Description: nitrilase Location: 95409-96153 bp Feature: domain Description: nitrilase Location: 95409-96153 bp Feature: gene Location: 96440-98557 bp Feature: domain Description: Lon_rel_chp Location: 96476-98552 bp Feature: domain Description: Lon_rel_chp Location: 96476-98552 bp Feature: gene Location: 98578-101175 bp Feature: domain Description: TIGR02687 Location: 98638-101134 bp Feature: domain Description: TIGR02687 Location: 9863 8-10113 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfeH (COG0385), RVT-UG5, nitrilase (cl11424), Lon_rel_chp (TIGR02653), TIGR02687 (TIGR02687 family protein)

Seq: WKQK01000059.1 Faecalibacterium prausnitzii strain BIOML-B3 scaffold59_size2647, whole genome shotgun sequence (2647 bp)
Overview 1 RT 1: 3-2310 bp Neighborhood of RT #1 [3, 2310] RVT_N RVT-GII GIIM Feature: gene Location: 3-413 bp Feature: gene Location: 418-2100 bp Feature: domain Description: RVT_N Location: 496-739 bp Feature: domain Description: RVT_N Location: 4 96-739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784-1447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 784 -14 4 7 bp Feature: domain Description: GIIM Note: maturase Location: 1498-1735 bp Feature: domain Description: GIIM Note: maturase Location: 14 98-1735 bp Feature: gene Location: 2179-2310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)