myRT

myRT report for GCA_009680085.1_ASM968008v1

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Seq: WKQM01000018.1 Faecalibacterium prausnitzii strain BIOML-B1 scaffold18_size56071, whole genome shotgun sequence (56071 bp)
Overview 1 RT 1: 23092-28181 bp Neighborhood of RT #1 [23092, 28255] Maff2 VirD4 RVT-GII Intron_maturas2 HNHc DUF3801 Feature: gene Location: 23092-23307 bp Feature: domain Description: Maff2 Location: 23095-23302 bp Feature: domain Description: Maff2 Location: 23095-23302 bp Feature: gene Location: 23516-24769 bp Feature: domain Description: VirD4 Location: 23522-24662 bp Feature: domain Description: VirD4 Location: 23522-24662 bp Feature: gene Location: 24899-26716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25163-25982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 63-25982 bp Feature: domain Description: Intron_maturas2 Location: 26054-26357 bp Feature: domain Description: Intron_maturas2 Location: 26054-26357 bp Feature: domain Description: HNHc Note: nucleases Location: 26537-26681 bp Feature: domain Description: HNHc Note: nucleases Location: 26537-26681 bp Feature: gene Location: 27276-27776 bp Feature: gene Location: 27773-28255 bp Feature: domain Description: DUF3801 Location: 27887-28181 bp Feature: domain Description: DUF3801 Location: 27887-281 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), VirD4 (COG3505), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF3801 (pfam12687)

Seq: WKQM01000001.1 Faecalibacterium prausnitzii strain BIOML-B1 scaffold1_size249949, whole genome shotgun sequence (249949 bp)
Overview 1 RT 1: 41553-44220 bp Neighborhood of RT #1 [41553, 44324] RVT-DGRs Phage_XkdX GH25_LytC-like Feature: gene Location: 41553-41963 bp Feature: gene Location: 41985-42281 bp Feature: gene Location: 42290-43330 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42488-43094 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42 488-43094 bp Feature: gene Location: 43484-43636 bp Feature: domain Description: Phage_XkdX Location: 43511-43634 bp Feature: domain Description: Phage_XkdX Location: 43511-43634 bp Feature: gene Location: 43647-44324 bp Feature: domain Description: GH25_LytC-like Location: 43659-44220 bp Feature: domain Description: GH2 5_LytC-like Location: 43659-442 2 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693), GH25_LytC-like (cd06414)

Seq: WKQM01000051.1 Faecalibacterium prausnitzii strain BIOML-B1 scaffold51_size12680, whole genome shotgun sequence (12680 bp)
Overview 1 RT 1: 4088-9803 bp Neighborhood of RT #1 [4088, 9803] RVT-GII Intron_maturas2 HNHc TraC-F-type Feature: gene Location: 4088-5005 bp Feature: gene Location: 5211-5402 bp Feature: gene Location: 5529-7325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5802-6612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5802-6612 bp Feature: domain Description: Intron_maturas2 Location: 6690-6972 bp Feature: domain Description: Intron_maturas2 Location: 6690-6972 bp Feature: domain Description: HNHc Note: nucleases Location: 7152-7305 bp Feature: domain Description: HNHc Note: nucleases Location: 7152-73 05 bp Feature: gene Location: 7474-8928 bp Feature: domain Description: TraC-F-type Location: 7510-8734 bp Feature: domain Description: TraC-F-type Location: 7510-873 4 bp Feature: gene Location: 8925-9803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraC-F-type (TIGR02746)

Seq: WKQM01000078.1 Faecalibacterium prausnitzii strain BIOML-B1 scaffold78_size2848, whole genome shotgun sequence (2848 bp)
Overview 1 RT 1: 3-2560 bp Neighborhood of RT #1 [3, 2637] RVT-GII HNHc Feature: gene Location: 3-287 bp Feature: gene Location: 721-2637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 5-1759 bp Feature: domain Description: HNHc Note: nucleases Location: 2389-2560 bp Feature: domain Description: HNHc Note: nucleases Location: 2389-2560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)