myRT

myRT report for GCA_009680205.1_ASM968020v1

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Seq: WKQQ01000031.1 [Eubacterium] rectale strain BIOML-A10 scaffold31_size17801, whole genome shotgun sequence (17801 bp)
Overview 1 RT 1: 94-5032 bp Neighborhood of RT #1 [94, 5049] RVT-GII GIIM PRK12353 M3B_PepF Feature: gene Location: 94-336 bp Feature: gene Location: 444-1838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1 386 bp Feature: domain Description: GIIM Note: maturase Location: 1443-1665 bp Feature: domain Description: GIIM Note: maturase Location: 1 443-1 665 bp Feature: gene Location: 2206-3138 bp Feature: domain Description: PRK12353 Location: 2215-3136 bp Feature: domain Description: PRK1 2353 Location: 221 5-31 36 bp Feature: gene Location: 3244-5049 bp Feature: domain Description: M3B_PepF Location: 3355-5032 bp Feature: domain Description: M3B_PepF Location: 3355-5032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12353 (putative amino acid kinase; Reviewed), M3B_PepF (cd09610), RVT-GII, GIIM (pfam08388)

Seq: WKQQ01000006.1 [Eubacterium] rectale strain BIOML-A10 scaffold6_size195897, whole genome shotgun sequence (195897 bp)
Overview 1 RT 1: 19192-23248 bp Neighborhood of RT #1 [19192, 23256] PRK13387 RVT-DGRs PRK12814 PRK12814 Fer4 PRK12814 ROK_glcA_fam Feature: gene Location: 19192-19575 bp Feature: domain Description: PRK13387 Location: 19198-19480 bp Feature: domain Description: PRK13387 Location: 19198-19480 bp Feature: gene Location: 19594-20046 bp Feature: gene Location: 20024-20524 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20027-20183 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 002 7-2 0183 bp Feature: gene Location: 20473-22293 bp Feature: domain Description: PRK12814 Location: 20485-20773 bp Feature: domain Description: PRK12 814 Location: 2 0485-2 0773 bp Feature: domain Description: PRK12814 Location: 20773-20962 bp Feature: domain Description: PRK12 814 Location: 2 0773-2 0962 bp Feature: domain Description: Fer4 Location: 21037-21088 bp Feature: domain Description: Fer4 Location: 2 1037-2 1088 bp Feature: domain Description: PRK12814 Location: 21121-22189 bp Feature: domain Description: PRK12 814 Location: 2 112 1-2 2 189 bp Feature: gene Location: 22321-23256 bp Feature: domain Description: ROK_glcA_fam Location: 22342-23248 bp Feature: domain Description: ROK_glcA_fam Location: 2 2 342 -2 32 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13387 (1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional), RVT-DGRs, PRK12814 (putative NADPH-dependent glutamate synthase small subunit; Provisional), Fer4 (pfam00037), ROK_glcA_fam (TIGR00744)

Seq: WKQQ01000008.1 [Eubacterium] rectale strain BIOML-A10 scaffold8_size129074, whole genome shotgun sequence (129074 bp)
Overview 1 RT 1: 70718-80042 bp Neighborhood of RT #1 [70718, 80191] DUF3801 VirD4 VirD4 RVT-GII TraG-D_C RVT-GII Intron_maturas2 HNHc SpoVG Feature: gene Location: 70718-71194 bp Feature: domain Description: DUF3801 Location: 70793-71078 bp Feature: domain Description: DUF3 801 Location: 70793 -71078 bp Feature: gene Location: 71191-72060 bp Feature: domain Description: VirD4 Location: 71446-71758 bp Feature: domain Description: VirD4 Location: 71446-71758 bp Feature: domain Description: VirD4 Location: 71827-71998 bp Feature: domain Description: VirD4 Location: 71827-71998 bp Feature: gene Location: 72686-74596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73016-73760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 016-73 760 bp Feature: gene Location: 74620-74775 bp Feature: gene Location: 74816-75778 bp Feature: domain Description: TraG-D_C Location: 75206-75560 bp Feature: domain Description: TraG-D_C Location: 75206-75560 bp Feature: gene Location: 76249-76914 bp Feature: gene Location: 77029-77244 bp Feature: gene Location: 77490-79322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77754-78585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77754-78585 bp Feature: domain Description: Intron_maturas2 Location: 78657-78972 bp Feature: domain Description: Intron_maturas2 Location: 78657-78972 bp Feature: domain Description: HNHc Note: nucleases Location: 79119-79293 bp Feature: domain Description: HNHc Note: nucleases Location: 79119-79293 bp Feature: gene Location: 79398-79700 bp Feature: gene Location: 79739-80191 bp Feature: domain Description: SpoVG Location: 79811-80042 bp Feature: domain Description: SpoVG Location: 79811-80042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, TraG-D_C (pfam12696), Intron_maturas2 (pfam01348), HNHc (smart00507), SpoVG (pfam04026)