myRT

myRT report for GCA_009680245.1_ASM968024v1

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Seq: WKQS01000003.1 [Eubacterium] rectale strain BIOML-A8 scaffold3_size247761, whole genome shotgun sequence (247847 bp)
Overview 1 RT 1: 26875-33552 bp Neighborhood of RT #1 [26875, 33572] M3B_PepF PRK12353 RVT-GII GIIM DegQ Feature: gene Location: 26875-28680 bp Feature: domain Description: M3B_PepF Location: 26986-28663 bp Feature: domain Description: M3B_PepF Location: 26986-28663 bp Feature: gene Location: 28786-29718 bp Feature: domain Description: PRK12353 Location: 28795-29716 bp Feature: domain Description: PRK1 2353 Location: 28795-2971 6 bp Feature: gene Location: 30086-31480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30404-31028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30404-31 028 bp Feature: domain Description: GIIM Note: maturase Location: 31085-31307 bp Feature: domain Description: GIIM Note: maturase Location: 31 085-31 307 bp Feature: gene Location: 31590-31898 bp Feature: gene Location: 31974-33572 bp Feature: domain Description: DegQ Location: 32499-33552 bp Feature: domain Description: DegQ Location: 32499-33552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M3B_PepF (cd09610), PRK12353 (putative amino acid kinase; Reviewed), RVT-GII, GIIM (pfam08388), DegQ (pfam08181)

Seq: WKQS01000005.1 [Eubacterium] rectale strain BIOML-A8 scaffold5_size195969, whole genome shotgun sequence (195969 bp)
Overview 1 RT 1: 172714-176683 bp Neighborhood of RT #1 [172714, 176778] ROK_glcA_fam PRK12814 PRK12814 Fer4 PRK12814 RVT-DGRs PRK13387 Feature: gene Location: 172714-173649 bp Feature: domain Description: ROK_glcA_fam Location: 172735-173641 bp Feature: domain Description: ROK_glcA_fam Location: 172 735-173641 bp Feature: gene Location: 173677-175497 bp Feature: domain Description: PRK12814 Location: 173689-173977 bp Feature: domain Description: PRK12 814 Location: 173689-173977 bp Feature: domain Description: PRK12814 Location: 173977-174166 bp Feature: domain Description: PRK12 814 Location: 173977-174166 bp Feature: domain Description: Fer4 Location: 174241-174292 bp Feature: domain Description: Fer4 Location: 1742 41-1742 92 bp Feature: domain Description: PRK12814 Location: 174325-175393 bp Feature: domain Description: PRK12 814 Location: 17432 5-175393 bp Feature: gene Location: 175446-175946 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 175449-175605 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 175449-175605 bp Feature: gene Location: 175924-176376 bp Feature: gene Location: 176395-176778 bp Feature: domain Description: PRK13387 Location: 176401-176683 bp Feature: domain Description: PRK13387 Location: 176401-176683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ROK_glcA_fam (TIGR00744), PRK12814 (putative NADPH-dependent glutamate synthase small subunit; Provisional), Fer4 (pfam00037), RVT-DGRs, PRK13387 (1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional)

Seq: WKQS01000008.1 [Eubacterium] rectale strain BIOML-A8 scaffold8_size130388, whole genome shotgun sequence (130388 bp)
Overview 1 RT 1: 72032-81356 bp Neighborhood of RT #1 [72032, 81505] DUF3801 VirD4 VirD4 RVT-GII TraG-D_C RVT-GII Intron_maturas2 HNHc SpoVG Feature: gene Location: 72032-72508 bp Feature: domain Description: DUF3801 Location: 72107-72392 bp Feature: domain Description: DUF3 801 Location: 72107-723 92 bp Feature: gene Location: 72505-73374 bp Feature: domain Description: VirD4 Location: 72760-73072 bp Feature: domain Description: VirD4 Location: 72760-73 072 bp Feature: domain Description: VirD4 Location: 73141-73312 bp Feature: domain Description: VirD4 Location: 73 141-73 3 12 bp Feature: gene Location: 74000-75910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74330-75074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743 3 0-75074 bp Feature: gene Location: 75934-76089 bp Feature: gene Location: 76130-77092 bp Feature: domain Description: TraG-D_C Location: 76520-76874 bp Feature: domain Description: TraG-D_C Location: 76520-76874 bp Feature: gene Location: 77563-78228 bp Feature: gene Location: 78343-78558 bp Feature: gene Location: 78804-80636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79068-79899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79068-79899 bp Feature: domain Description: Intron_maturas2 Location: 79971-80286 bp Feature: domain Description: Intron_maturas2 Location: 79971-80286 bp Feature: domain Description: HNHc Note: nucleases Location: 80433-80607 bp Feature: domain Description: HNHc Note: nucleases Location: 8043 3 -80607 bp Feature: gene Location: 80712-81014 bp Feature: gene Location: 81053-81505 bp Feature: domain Description: SpoVG Location: 81125-81356 bp Feature: domain Description: SpoVG Location: 81125-813 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, TraG-D_C (pfam12696), Intron_maturas2 (pfam01348), HNHc (smart00507), SpoVG (pfam04026)