myRT

myRT report for GCA_009680315.1_ASM968031v1

Download annotations/find similar RTs

Seq: WKQV01000004.1 [Eubacterium] rectale strain BIOML-A5 scaffold4_size197730, whole genome shotgun sequence (197730 bp)
Overview 1 RT 1: 73-3101 bp 2 RT 2: 21025-25081 bp Neighborhood of RT #1 [73, 3112] RVT-GII GIIM BDH Neighborhood of RT #2 [21025, 25089] PRK13387 RVT-DGRs PRK12814 PRK12814 Fer4 PRK12814 ROK_glcA_fam Feature: gene Location: 73-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391 -1 01 5 bp Feature: domain Description: GIIM Note: maturase Location: 1072-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1 072-1 294 bp Feature: gene Location: 1577-1885 bp Feature: gene Location: 1955-3112 bp Feature: domain Description: BDH Location: 1964-3101 bp Feature: domain Description: BDH Location: 1 964-31 01 bp Feature: gene Location: 21025-21408 bp Feature: domain Description: PRK13387 Location: 21031-21313 bp Feature: domain Description: PRK1 3387 Location: 21 031 -21 31 3 bp Feature: gene Location: 21427-21879 bp Feature: gene Location: 21857-22357 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21860-22016 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21 860-2201 6 bp Feature: gene Location: 22306-24126 bp Feature: domain Description: PRK12814 Location: 22318-22606 bp Feature: domain Description: PRK1 281 4 Location: 2231 8-22606 bp Feature: domain Description: PRK12814 Location: 22606-22795 bp Feature: domain Description: PRK1 281 4 Location: 22606-22795 bp Feature: domain Description: Fer4 Location: 22870-22921 bp Feature: domain Description: Fer4 Location: 22870-22921 bp Feature: domain Description: PRK12814 Location: 22954-24022 bp Feature: domain Description: PRK1 281 4 Location: 22954-24022 bp Feature: gene Location: 24154-25089 bp Feature: domain Description: ROK_glcA_fam Location: 24175-25081 bp Feature: domain Description: ROK_glcA_fam Location: 241 75-25081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BDH (cd08187), RVT-GII, GIIM (pfam08388), PRK13387 (1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional), RVT-DGRs, PRK12814 (putative NADPH-dependent glutamate synthase small subunit; Provisional), Fer4 (pfam00037), ROK_glcA_fam (TIGR00744)

Seq: WKQV01000007.1 [Eubacterium] rectale strain BIOML-A5 scaffold7_size129074, whole genome shotgun sequence (129074 bp)
Overview 1 RT 1: 70718-80042 bp Neighborhood of RT #1 [70718, 80191] DUF3801 VirD4 VirD4 RVT-GII TraG-D_C RVT-GII Intron_maturas2 HNHc SpoVG Feature: gene Location: 70718-71194 bp Feature: domain Description: DUF3801 Location: 70793-71078 bp Feature: domain Description: DUF3801 Location: 70793-71078 bp Feature: gene Location: 71191-72060 bp Feature: domain Description: VirD4 Location: 71446-71758 bp Feature: domain Description: VirD4 Location: 71446-71758 bp Feature: domain Description: VirD4 Location: 71827-71998 bp Feature: domain Description: VirD4 Location: 7182 7-71998 bp Feature: gene Location: 72686-74596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73016-73760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73016-73760 bp Feature: gene Location: 74620-74775 bp Feature: gene Location: 74816-75778 bp Feature: domain Description: TraG-D_C Location: 75206-75560 bp Feature: domain Description: TraG-D_C Location: 752 06-75560 bp Feature: gene Location: 76249-76914 bp Feature: gene Location: 77029-77244 bp Feature: gene Location: 77490-79322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77754-78585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77754-78585 bp Feature: domain Description: Intron_maturas2 Location: 78657-78972 bp Feature: domain Description: Intron_maturas2 Location: 78657-78972 bp Feature: domain Description: HNHc Note: nucleases Location: 79119-79293 bp Feature: domain Description: HNHc Note: nucleases Location: 79119-792 93 bp Feature: gene Location: 79398-79700 bp Feature: gene Location: 79739-80191 bp Feature: domain Description: SpoVG Location: 79811-80042 bp Feature: domain Description: SpoVG Location: 79811-80042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, TraG-D_C (pfam12696), Intron_maturas2 (pfam01348), HNHc (smart00507), SpoVG (pfam04026)