myRT

myRT report for GCA_009680455.1_ASM968045v1

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Seq: WKRD01000011.1 Lachnospira eligens strain BIOML-A1 scaffold11_size82979, whole genome shotgun sequence (82979 bp)
Overview 1 RT 1: 45628-50368 bp Neighborhood of RT #1 [45628, 50368] HsdM HTH_26 RVT-UG17 SLATT_5 Feature: gene Location: 45628-47133 bp Feature: domain Description: HsdM Location: 45661-47113 bp Feature: domain Description: HsdM Location: 45661 -471 1 3 bp Feature: gene Location: 47202-47417 bp Feature: domain Description: HTH_26 Location: 47241-47412 bp Feature: domain Description: HTH_26 Location: 47241 -4741 2 bp Feature: gene Location: 47774-49084 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 48002-48587 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 48002-48587 bp Feature: gene Location: 49085-49702 bp Feature: domain Description: SLATT_5 Location: 49148-49688 bp Feature: domain Description: SLATT_5 Location: 491 48-49688 bp Feature: gene Location: 49835-50368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), HTH_26 (pfam13443), RVT-UG17, SLATT_5 (pfam18160)

Seq: WKRD01000004.1 Lachnospira eligens strain BIOML-A1 scaffold4_size305990, whole genome shotgun sequence (305876 bp)
Overview 1 RT 1: 279852-282705 bp Neighborhood of RT #1 [279852, 282705] RVT-GII GIIM YgiT_finger Feature: gene Location: 279852-280247 bp Feature: gene Location: 280476-280649 bp Feature: gene Location: 280700-281998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280955-281648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 80955-2 81648 bp Feature: domain Description: GIIM Note: maturase Location: 281708-281927 bp Feature: domain Description: GIIM Note: maturase Location: 2 81708-2 8192 7 bp Feature: gene Location: 282120-282317 bp Feature: domain Description: YgiT_finger Location: 282207-282279 bp Feature: domain Description: YgiT_finger Location: 2 82 2 07-2 82 2 79 bp Feature: gene Location: 282364-282705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YgiT_finger (TIGR03831)