myRT

myRT report for GCA_009687865.1_ASM968786v1

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Seq: BLAE01000016.1 Acrocarpospora macrocephala NBRC 16266 DNA, sequence016, whole genome shotgun sequence (197123 bp)
Overview 1 RT 1: 36425-44097 bp Neighborhood of RT #1 [36425, 44474] COG5635 rve_3 RVT-GII GIIM Mrr_cat Feature: gene Location: 36425-39019 bp Feature: domain Description: COG5635 Location: 36884-37241 bp Feature: domain Description: COG5635 Location: 36884-37241 bp Feature: gene Location: 39176-39844 bp Feature: domain Description: rve_3 Location: 39554-39731 bp Feature: domain Description: rve_3 Location: 39554-39731 bp Feature: gene Location: 39916-41175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40120-40780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401 20-40780 bp Feature: domain Description: GIIM Note: maturase Location: 40864-41083 bp Feature: domain Description: GIIM Note: maturase Location: 40864-41 083 bp Feature: gene Location: 41817-43628 bp Feature: gene Location: 43659-44474 bp Feature: domain Description: Mrr_cat Location: 43698-44097 bp Feature: domain Description: Mrr_cat Location: 43698-44097 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), rve_3 (pfam13683), RVT-GII, GIIM (pfam08388), Mrr_cat (pfam04471)

Seq: BLAE01000028.1 Acrocarpospora macrocephala NBRC 16266 DNA, sequence028, whole genome shotgun sequence (132266 bp)
Overview 1 RT 1: 41707-48128 bp Neighborhood of RT #1 [41707, 48175] CoxM AraH RVT-GII GIIM PRK08323 nitrilase Feature: gene Location: 41707-42552 bp Feature: domain Description: CoxM Location: 41737-42547 bp Feature: domain Description: CoxM Location: 41737-42 547 bp Feature: gene Location: 42733-43761 bp Feature: domain Description: AraH Location: 42832-43729 bp Feature: domain Description: AraH Location: 42 832 -4372 9 bp Feature: gene Location: 43902-45161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44097-44730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44097-44730 bp Feature: domain Description: GIIM Note: maturase Location: 44814-45024 bp Feature: domain Description: GIIM Note: maturase Location: 44814-4502 4 bp Feature: gene Location: 45884-47299 bp Feature: domain Description: PRK08323 Location: 45923-47282 bp Feature: domain Description: PRK0832 3 Location: 4592 3-472 82 bp Feature: gene Location: 47312-48175 bp Feature: domain Description: nitrilase Location: 47387-48128 bp Feature: domain Description: nitrilase Location: 47387-4812 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CoxM (COG1319), AraH (COG1172), RVT-GII, GIIM (pfam08388), PRK08323 (phenylhydantoinase; Validated), nitrilase (cl11424)

Seq: BLAE01000040.1 Acrocarpospora macrocephala NBRC 16266 DNA, sequence040, whole genome shotgun sequence (104103 bp)
Overview 1 RT 1: 324-6748 bp Neighborhood of RT #1 [324, 6822] DDE_5 Phage_int_SAM_1 Phage_int_SAM_1 INT_RitA_C_like RVT-GII GIIM INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like Feature: gene Location: 324-1325 bp Feature: domain Description: DDE_5 Location: 333-693 bp Feature: domain Description: DDE_5 Location: 3 3 3 -693 bp Feature: gene Location: 1483-2730 bp Feature: domain Description: Phage_int_SAM_1 Location: 1588-1792 bp Feature: domain Description: Phage_int_SAM_1 Location: 1588-1792 bp Feature: domain Description: Phage_int_SAM_1 Location: 1849-2089 bp Feature: domain Description: Phage_int_SAM_1 Location: 1849-2089 bp Feature: domain Description: INT_RitA_C_like Location: 2191-2701 bp Feature: domain Description: INT_RitA_C_like Location: 2191-2701 bp Feature: gene Location: 3568-5037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3910-4606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 910-4606 bp Feature: domain Description: GIIM Note: maturase Location: 4675-4897 bp Feature: domain Description: GIIM Note: maturase Location: 4675-4897 bp Feature: gene Location: 5315-5833 bp Feature: domain Description: INT_RitB_C_like Location: 5603-5807 bp Feature: domain Description: INT_RitB_C_like Location: 5603 -5807 bp Feature: gene Location: 5830-6822 bp Feature: domain Description: Phage_int_SAM_1 Location: 5866-6112 bp Feature: domain Description: Phage_int_SAM_1 Location: 5866-6112 bp Feature: domain Description: INT_RitC_C_like Location: 6202-6748 bp Feature: domain Description: INT_RitC_C_like Location: 6202-6748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182)

Seq: BLAE01000153.1 Acrocarpospora macrocephala NBRC 16266 DNA, sequence153, whole genome shotgun sequence (1890 bp)
Overview 1 RT 1: 480-1665 bp Neighborhood of RT #1 [480, 1784] RVT-GII GIIM Feature: gene Location: 480-1784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 735-1365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 735-1365 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1665 bp Feature: domain Description: GIIM Note: maturase Location: 14 4 6-1665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)