myRT

myRT report for GCA_009693865.1_ASM969386v1

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Seq: SHWL01000081.1 Acetobacteraceae bacterium isolate Baikal-deep-G65 BACOMB-C12172, whole genome shotgun sequence (20825 bp)
Overview 1 RT 1: 17856-20584 bp Neighborhood of RT #1 [17856, 20823] Chrome_Resist MFS RVT-UG4 Feature: gene Location: 17856-19025 bp Feature: domain Description: Chrome_Resist Location: 18615-19008 bp Feature: domain Description: Chrome_Resist Location: 1 861 5-1 9008 bp Feature: gene Location: 19025-19798 bp Feature: domain Description: MFS Location: 19112-19667 bp Feature: domain Description: MFS Location: 1 91 1 2-1 9667 bp Feature: gene Location: 19822-20823 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 20131-20584 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 201 31 -20584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Chrome_Resist (pfam09828), MFS (cl28910), RVT-UG4

Seq: SHWL01000105.1 Acetobacteraceae bacterium isolate Baikal-deep-G65 BACOMB-C16635, whole genome shotgun sequence (16636 bp)
Overview 1 RT 1: 13377-16348 bp Neighborhood of RT #1 [13377, 16419] RVT-GII GIIM CHAD Feature: gene Location: 13377-13547 bp Feature: gene Location: 13616-13792 bp Feature: gene Location: 14107-15423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14395-15052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14395-15052 bp Feature: domain Description: GIIM Note: maturase Location: 15121-15322 bp Feature: domain Description: GIIM Note: maturase Location: 1512 1-1532 2 bp Feature: gene Location: 15691-16419 bp Feature: domain Description: CHAD Location: 15694-16348 bp Feature: domain Description: CHAD Location: 15694-16348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CHAD (smart00880)

Seq: SHWL01000047.1 Acetobacteraceae bacterium isolate Baikal-deep-G65 BACOMB-C7657, whole genome shotgun sequence (28117 bp)
Overview 1 RT 1: 2893-6495 bp Neighborhood of RT #1 [2893, 6509] RVT-DGRs Hrd Pentapeptide YfmG Feature: gene Location: 2893-3135 bp Feature: gene Location: 3560-3937 bp Feature: gene Location: 3985-4488 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4099-4438 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4099-443 8 bp Feature: gene Location: 4577-5065 bp Feature: domain Description: Hrd Location: 4826-5027 bp Feature: domain Description: Hrd Location: 4826-5027 bp Feature: gene Location: 5172-6509 bp Feature: domain Description: Pentapeptide Location: 5295-5409 bp Feature: domain Description: Pentapeptide Location: 5295-5409 bp Feature: domain Description: YfmG Location: 5583-6495 bp Feature: domain Description: YfmG Location: 5583 -6495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Hrd (LOAD_Hrd), Pentapeptide (pfam00805), YfmG (COG1262)