myRT

myRT report for GCA_009695405.1_ASM969540v1

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Seq: SIAZ01000022.1 Pedosphaera sp. isolate Baikal-deep-G220 BACOMB-C11400, whole genome shotgun sequence (21782 bp)
Overview 1 RT 1: 373-4658 bp Neighborhood of RT #1 [373, 4807] RVT-GII GIIM INT_Rci_Hp1_C Feature: gene Location: 373-1119 bp Feature: gene Location: 1928-2065 bp Feature: gene Location: 2086-2679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2182-2317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 82-231 7 bp Feature: domain Description: GIIM Note: maturase Location: 2359-2560 bp Feature: domain Description: GIIM Note: maturase Location: 2359-2560 bp Feature: gene Location: 2914-3321 bp Feature: gene Location: 3674-4807 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4220-4658 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 4220-4658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), INT_Rci_Hp1_C (cd00796)

Seq: SIAZ01000149.1 Pedosphaera sp. isolate Baikal-deep-G220 BACOMB-C36629, whole genome shotgun sequence (9080 bp)
Overview 1 RT 1: 338-4674 bp Neighborhood of RT #1 [338, 4674] opgC ANK RVT-GII GIIM RVT-GII Feature: gene Location: 338-2212 bp Feature: domain Description: opgC Location: 368-1592 bp Feature: domain Description: opgC Location: 368-1592 bp Feature: domain Description: ANK Location: 1811-2168 bp Feature: domain Description: ANK Location: 1811-2 168 bp Feature: gene Location: 2734-3642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2737-3154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 737-3154 bp Feature: domain Description: GIIM Note: maturase Location: 3217-3430 bp Feature: domain Description: GIIM Note: maturase Location: 32 17-3430 bp Feature: gene Location: 3691-4203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4057-4201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4057-42 01 bp Feature: gene Location: 4061-4351 bp Feature: gene Location: 4390-4674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), opgC (PRK03854), ANK (smart00248)

Seq: SIAZ01000001.1 Pedosphaera sp. isolate Baikal-deep-G220 BACOMB-C5332, whole genome shotgun sequence (34792 bp)
Overview 1 RT 1: 122-1229 bp Neighborhood of RT #1 [122, 1229] RVT-GII group_II_RT_mat Feature: gene Location: 122-757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125-713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125-713 bp Feature: gene Location: 764-901 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 767-893 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 767-893 bp Feature: gene Location: 969-1229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)