myRT

myRT report for GCA_009695585.1_ASM969558v1

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Seq: VUNR01000013.1 Selenomonadaceae bacterium DSM 108025 strain WCA-693-APC-5D-A seq13, whole genome shotgun sequence (80815 bp)
Overview 1 RT 1: 51918-55871 bp Neighborhood of RT #1 [51918, 55891] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 51918-52778 bp Feature: gene Location: 52837-53364 bp Feature: gene Location: 53634-54785 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53820-54528 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53820-54528 bp Feature: gene Location: 55126-55431 bp Feature: gene Location: 55442-55891 bp Feature: domain Description: Phage_holin_4_1 Location: 55538-55871 bp Feature: domain Description: Phage_holin_4_1 Location: 55538-55871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: VUNR01000018.1 Selenomonadaceae bacterium DSM 108025 strain WCA-693-APC-5D-A seq18, whole genome shotgun sequence (55741 bp)
Overview 1 RT 1: 39292-42270 bp Neighborhood of RT #1 [39292, 42270] RVT-DGRs Feature: gene Location: 39292-40152 bp Feature: gene Location: 40211-40738 bp Feature: gene Location: 41008-41679 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41194-41533 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41194-41533 bp Feature: gene Location: 41730-42044 bp Feature: gene Location: 42016-42270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VUNR01000002.1 Selenomonadaceae bacterium DSM 108025 strain WCA-693-APC-5D-A seq2, whole genome shotgun sequence (203324 bp)
Overview 1 RT 1: 152902-158991 bp Neighborhood of RT #1 [152902, 159131] KOG1378 RVT-GII GIIM HsdR HsdR PcfJ SEL1 Feature: gene Location: 152902-153096 bp Feature: gene Location: 153931-155475 bp Feature: domain Description: KOG1378 Location: 154123-155089 bp Feature: domain Description: KOG13 78 Location: 154123 -155089 bp Feature: gene Location: 155598-156602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155601-156159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155601-156159 bp Feature: domain Description: GIIM Note: maturase Location: 156216-156450 bp Feature: domain Description: GIIM Note: maturase Location: 156216-156450 bp Feature: gene Location: 156604-156933 bp Feature: domain Description: HsdR Location: 156652-156832 bp Feature: domain Description: HsdR Location: 156652-15683 2 bp Feature: domain Description: HsdR Location: 156844-156910 bp Feature: domain Description: HsdR Location: 156844-156910 bp Feature: gene Location: 156975-159131 bp Feature: domain Description: PcfJ Location: 158112-158526 bp Feature: domain Description: PcfJ Location: 158112-158526 bp Feature: domain Description: SEL1 Location: 158895-158991 bp Feature: domain Description: SEL1 Location: 158895-158991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1378 (KOG1378, Purple acid phosphatase ), RVT-GII, GIIM (pfam08388), HsdR (COG4096), PcfJ (pfam14284), SEL1 (smart00671)

Seq: VUNR01000033.1 Selenomonadaceae bacterium DSM 108025 strain WCA-693-APC-5D-A seq33, whole genome shotgun sequence (27808 bp)
Overview 1 RT 1: 4760-7452 bp Neighborhood of RT #1 [4760, 7452] TnpV RVT-GII GIIM DUF1413 Feature: gene Location: 4760-5134 bp Feature: domain Description: TnpV Location: 4796-5126 bp Feature: domain Description: TnpV Location: 4 796-5126 bp Feature: gene Location: 5115-5615 bp Feature: gene Location: 5719-6372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5722-5929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5722-5929 bp Feature: domain Description: GIIM Note: maturase Location: 5986-6220 bp Feature: domain Description: GIIM Note: maturase Location: 5986-6220 bp Feature: gene Location: 6714-7073 bp Feature: domain Description: DUF1413 Location: 6888-7035 bp Feature: domain Description: DUF14 13 Location: 6888-7035 bp Feature: gene Location: 7078-7452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpV (pfam14198), RVT-GII, GIIM (pfam08388), DUF1413 (pfam07205)

Seq: VUNR01000005.1 Selenomonadaceae bacterium DSM 108025 strain WCA-693-APC-5D-A seq5, whole genome shotgun sequence (171250 bp)
Overview 1 RT 1: 155215-158070 bp Neighborhood of RT #1 [155215, 158070] PHA00653 RVT-DGRs Feature: gene Location: 155215-156060 bp Feature: domain Description: PHA00653 Location: 155257-156037 bp Feature: domain Description: PHA0065 3 Location: 15 5 25 7-15 6037 bp Feature: gene Location: 156223-156417 bp Feature: gene Location: 156449-157123 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 156659-157121 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15 665 9-15 7121 bp Feature: gene Location: 157590-157739 bp Feature: gene Location: 157861-158070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), RVT-DGRs