myRT

myRT report for GCA_009695775.1_ASM969577v1

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Seq: VUNG01000032.1 Prevotellaceae bacterium LKV-178-WT-2A seq32, whole genome shotgun sequence (44609 bp)
Overview 1 RT 1: 6402-11507 bp Neighborhood of RT #1 [6402, 11740] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 HNHc SSB_OBF KOG1653 Feature: gene Location: 6402-6953 bp Feature: gene Location: 6977-8191 bp Feature: domain Description: Arm-DNA-bind_5 Location: 7013-7313 bp Feature: domain Description: Arm-DNA-bind_5 Location: 701 3-731 3 bp Feature: domain Description: Phage_int_SAM_5 Location: 7367-7667 bp Feature: domain Description: Phage_int_SAM_5 Location: 7367-7667 bp Feature: domain Description: INTN1_C_like Location: 7727-8171 bp Feature: domain Description: INTN1 _C_like Location: 7727-81 71 bp Feature: gene Location: 8738-10540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9002-9824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9002-9824 bp Feature: domain Description: Intron_maturas2 Location: 10001-10205 bp Feature: domain Description: Intron_maturas2 Location: 1 0001 -1 0205 bp Feature: domain Description: HNHc Note: nucleases Location: 10358-10532 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0358-1 0532 bp Feature: gene Location: 10696-11004 bp Feature: gene Location: 11090-11740 bp Feature: domain Description: SSB_OBF Location: 11108-11330 bp Feature: domain Description: SSB_OBF Location: 1 1 1 08-1 1 330 bp Feature: domain Description: KOG1653 Location: 11354-11507 bp Feature: domain Description: KOG1 653 Location: 1 1 354-1 1 507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SSB_OBF (cd04496), KOG1653 (KOG1653, Single-stranded DNA-binding protein )

Seq: VUNG01000051.1 Prevotellaceae bacterium LKV-178-WT-2A seq51, whole genome shotgun sequence (21865 bp)
Overview 1 RT 1: 1156-7428 bp Neighborhood of RT #1 [1156, 8243] OCH1 AbiH RVT-UG8 RVT-UG3 FRG Feature: gene Location: 1156-1929 bp Feature: domain Description: OCH1 Location: 1165-1471 bp Feature: domain Description: OCH1 Location: 1165-1471 bp Feature: gene Location: 1948-2922 bp Feature: domain Description: AbiH Location: 1975-2662 bp Feature: domain Description: AbiH Location: 1975-2 662 bp Feature: gene Location: 3087-5306 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3687-4140 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3687-4140 bp Feature: gene Location: 5287-6744 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5740-6250 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5740-62 50 bp Feature: gene Location: 6775-6903 bp Feature: gene Location: 6957-8243 bp Feature: domain Description: FRG Location: 7143-7428 bp Feature: domain Description: FRG Location: 7143-742 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OCH1 (COG3774), AbiH (pfam14253), RVT-UG8, RVT-UG3, FRG (smart00901)