myRT

myRT report for GCA_009696065.1_ASM969606v1

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Seq: VUMS01000025.1 Lachnospiraceae bacterium BSM-380-WT-5A seq25, whole genome shotgun sequence (36666 bp)
Overview 1 RT 1: 33705-36424 bp Neighborhood of RT #1 [33705, 36424] RVT-GII GIIM Feature: gene Location: 33705-33944 bp Feature: gene Location: 34236-34430 bp Feature: gene Location: 34522-35811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34816-35446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481 6-35446 bp Feature: domain Description: GIIM Note: maturase Location: 35530-35752 bp Feature: domain Description: GIIM Note: maturase Location: 35530-35752 bp Feature: gene Location: 36091-36240 bp Feature: gene Location: 36245-36424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VUMS01000031.1 Lachnospiraceae bacterium BSM-380-WT-5A seq31, whole genome shotgun sequence (26750 bp)
Overview 1 RT 1: 23301-26633 bp Neighborhood of RT #1 [23301, 26749] PrgI RVT-GII HNHc Feature: gene Location: 23301-23690 bp Feature: domain Description: PrgI Location: 23319-23589 bp Feature: domain Description: PrgI Location: 2 3319-2 3589 bp Feature: gene Location: 23718-24590 bp Feature: gene Location: 24857-26749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25196-25934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5196-2 5934 bp Feature: domain Description: HNHc Note: nucleases Location: 26483-26633 bp Feature: domain Description: HNHc Note: nucleases Location: 2 6483-2 6633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), RVT-GII, HNHc (smart00507)

Seq: VUMS01000032.1 Lachnospiraceae bacterium BSM-380-WT-5A seq32, whole genome shotgun sequence (25845 bp)
Overview 1 RT 1: 2567-6423 bp Neighborhood of RT #1 [2567, 6530] PepX_C UbiE RVT-GII Acetyltransf_7 Feature: gene Location: 2567-3145 bp Feature: domain Description: PepX_C Location: 2780-3113 bp Feature: domain Description: PepX_C Location: 2780-3 113 bp Feature: gene Location: 3451-4053 bp Feature: domain Description: UbiE Location: 3505-3883 bp Feature: domain Description: UbiE Location: 3 505-3 883 bp Feature: gene Location: 4178-5473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4433-5123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443 3 -5123 bp Feature: gene Location: 5526-5771 bp Feature: gene Location: 5988-6530 bp Feature: domain Description: Acetyltransf_7 Location: 6186-6423 bp Feature: domain Description: Acetyltransf_7 Location: 6186-6423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PepX_C (smart00939), UbiE (COG2226), RVT-GII, Acetyltransf_7 (pfam13508)

Seq: VUMS01000060.1 Lachnospiraceae bacterium BSM-380-WT-5A seq60, whole genome shotgun sequence (5233 bp)
Overview 1 RT 1: 274-4826 bp Neighborhood of RT #1 [274, 5023] HTH_26 DUF1819 RVT-UG3 RVT-UG8 Methyltransf_25 Feature: gene Location: 274-501 bp Feature: domain Description: HTH_26 Location: 295-472 bp Feature: domain Description: HTH_26 Location: 295-4 72 bp Feature: gene Location: 513-719 bp Feature: domain Description: DUF1819 Location: 552-705 bp Feature: domain Description: DUF1819 Location: 552-705 bp Feature: gene Location: 925-2241 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1216-1690 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1216-1690 bp Feature: gene Location: 2403-4421 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2937-3375 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2937-3375 bp Feature: gene Location: 4439-5023 bp Feature: domain Description: Methyltransf_25 Location: 4562-4826 bp Feature: domain Description: Methyltransf_25 Location: 4 562-4 826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_26 (pfam13443), DUF1819 (pfam08849), RVT-UG3, RVT-UG8, Methyltransf_25 (pfam13649)

Seq: VUMS01000077.1 Lachnospiraceae bacterium BSM-380-WT-5A seq77, whole genome shotgun sequence (1835 bp)
Overview 1 RT 1: 36-1717 bp Neighborhood of RT #1 [36, 1833] RVT-GII HNHc Feature: gene Location: 36-182 bp Feature: gene Location: 186-365 bp Feature: gene Location: 442-1833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445 -1018 bp Feature: domain Description: HNHc Note: nucleases Location: 1567-1717 bp Feature: domain Description: HNHc Note: nucleases Location: 15 67-1717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: VUMS01000008.1 Lachnospiraceae bacterium BSM-380-WT-5A seq8, whole genome shotgun sequence (122493 bp)
Overview 1 RT 1: 9439-14264 bp Neighborhood of RT #1 [9439, 14332] PrfC REC RVT-GII TMAO_torS PBP2_BvgS_HisK_like Feature: gene Location: 9439-11031 bp Feature: domain Description: PrfC Location: 9448-11023 bp Feature: domain Description: PrfC Location: 9448-11023 bp Feature: gene Location: 11331-11531 bp Feature: domain Description: REC Location: 11337-11511 bp Feature: domain Description: REC Location: 11337-11511 bp Feature: gene Location: 11615-12283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11807-12281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11807-12281 bp Feature: gene Location: 12591-14009 bp Feature: domain Description: TMAO_torS Location: 12783-14001 bp Feature: domain Description: TMAO_torS Location: 12783-14001 bp Feature: gene Location: 14027-14332 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 14051-14264 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 14051-1426 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrfC (COG4108), REC (smart00448), RVT-GII, TMAO_torS (TIGR02956), PBP2_BvgS_HisK_like (cd01007)