myRT

myRT report for GCA_009696565.1_ASM969656v1

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Seq: VULT01000011.1 Bacteroidales bacterium Oil-RF-744-WCA-WT-10 seq11, whole genome shotgun sequence (108636 bp)
Overview 1 RT 1: 60633-66583 bp Neighborhood of RT #1 [60633, 66963] WYL WG_beta_rep WG_beta_rep RVT-Retrons LRR_3 LRR_3 LRR_5 LRR_3 LRR_3 Feature: gene Location: 60633-61748 bp Feature: domain Description: WYL Location: 61182-61731 bp Feature: domain Description: WYL Location: 61 1 82-61 731 bp Feature: gene Location: 61808-62251 bp Feature: domain Description: WG_beta_rep Location: 61889-61976 bp Feature: domain Description: WG_beta_rep Location: 61 889-61 976 bp Feature: domain Description: WG_beta_rep Location: 62078-62123 bp Feature: domain Description: WG_beta_rep Location: 62078-621 23 bp Feature: gene Location: 62562-64196 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 62745-63354 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 62745-63354 bp Feature: gene Location: 64198-65043 bp Feature: gene Location: 65311-66963 bp Feature: domain Description: LRR_3 Location: 65353-65569 bp Feature: domain Description: LRR_3 Location: 65353-65569 bp Feature: domain Description: LRR_3 Location: 65581-65836 bp Feature: domain Description: LRR_3 Location: 65581 -65836 bp Feature: domain Description: LRR_5 Location: 65860-66052 bp Feature: domain Description: LRR_5 Location: 65860-66052 bp Feature: domain Description: LRR_3 Location: 66121-66289 bp Feature: domain Description: LRR_3 Location: 661 21 -66289 bp Feature: domain Description: LRR_3 Location: 66409-66583 bp Feature: domain Description: LRR_3 Location: 66409-66583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), WG_beta_rep (pfam14903), RVT-Retrons, LRR_3 (sd00036), LRR_5 (pfam13306)

Seq: VULT01000004.1 Bacteroidales bacterium Oil-RF-744-WCA-WT-10 seq4, whole genome shotgun sequence (225771 bp)
Overview 1 RT 1: 212139-217456 bp Neighborhood of RT #1 [212139, 217456] ruvC RVT-GII GIIM Feature: gene Location: 212139-212711 bp Feature: domain Description: ruvC Location: 212166-212640 bp Feature: domain Description: ruvC Location: 2 12 166-2 12 640 bp Feature: gene Location: 212725-214014 bp Feature: gene Location: 214529-215491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214862-215480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 14862 -2 15480 bp Feature: gene Location: 215507-215926 bp Feature: domain Description: GIIM Note: maturase Location: 215534-215765 bp Feature: domain Description: GIIM Note: maturase Location: 2 15534-2 15765 bp Feature: gene Location: 216080-217456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ruvC (TIGR00228), RVT-GII, GIIM (pfam08388)

Seq: VULT01000006.1 Bacteroidales bacterium Oil-RF-744-WCA-WT-10 seq6, whole genome shotgun sequence (196506 bp)
Overview 1 RT 1: 27035-30135 bp Neighborhood of RT #1 [27035, 30152] rpmI rplT RVT-GII GIIM FolC Feature: gene Location: 27035-27232 bp Feature: domain Description: rpmI Location: 27038-27227 bp Feature: domain Description: rpmI Location: 2703 8-27227 bp Feature: gene Location: 27359-27709 bp Feature: domain Description: rplT Location: 27368-27704 bp Feature: domain Description: rplT Location: 273 68-27704 bp Feature: gene Location: 28103-28288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28148-28277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28148-28277 bp Feature: gene Location: 28304-28723 bp Feature: domain Description: GIIM Note: maturase Location: 28331-28562 bp Feature: domain Description: GIIM Note: maturase Location: 283 3 1-28562 bp Feature: gene Location: 28866-30152 bp Feature: domain Description: FolC Location: 28896-30135 bp Feature: domain Description: FolC Location: 28896-3 013 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpmI (PRK00172), rplT (PRK05185), RVT-GII, GIIM (pfam08388), FolC (COG0285)

Seq: VULT01000008.1 Bacteroidales bacterium Oil-RF-744-WCA-WT-10 seq8, whole genome shotgun sequence (128292 bp)
Overview 1 RT 1: 115592-119590 bp Neighborhood of RT #1 [115592, 119868] RVT-GII HTH_XRE PRK11331 Feature: gene Location: 115592-116056 bp Feature: gene Location: 116698-116889 bp Feature: gene Location: 116840-117700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117173-117614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117173-117614 bp Feature: gene Location: 117923-118414 bp Feature: domain Description: HTH_XRE Location: 117947-118118 bp Feature: domain Description: HTH_XRE Location: 11794 7-118118 bp Feature: gene Location: 118420-119868 bp Feature: domain Description: PRK11331 Location: 119092-119590 bp Feature: domain Description: PRK11331 Location: 119092-119590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_XRE (smart00530), PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional)