myRT

myRT report for GCA_009709915.1_ASM970991v1

Download annotations/find similar RTs

Seq: WCFD01000009.1 Escherichia coli strain SE36 contig00009, whole genome shotgun sequence (184163 bp)
Overview 1 RT 1: 130953-134836 bp Neighborhood of RT #1 [130953, 134841] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 130953-131669 bp Feature: domain Description: rph Location: 130956-131664 bp Feature: domain Description: rph Location: 1 30956-1 31 664 bp Feature: gene Location: 131721-132377 bp Feature: domain Description: pyrE Location: 131739-132372 bp Feature: domain Description: pyrE Location: 1 31 739-1 32372 bp Feature: gene Location: 132675-133634 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132810-133359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3281 0-1 33359 bp Feature: gene Location: 133680-134276 bp Feature: domain Description: slmA Location: 133686-134262 bp Feature: domain Description: slmA Location: 1 33686-1 34262 bp Feature: gene Location: 134383-134841 bp Feature: domain Description: dut Location: 134389-134836 bp Feature: domain Description: dut Location: 1 34389-1 34836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: WCFD01000038.1 Escherichia coli strain SE36 contig00038, whole genome shotgun sequence (19942 bp)
Overview 1 RT 1: 16372-19714 bp Neighborhood of RT #1 [16372, 19941] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 16372-16512 bp Feature: gene Location: 16525-17076 bp Feature: domain Description: SLATT_5 Location: 16531-17047 bp Feature: domain Description: SLATT_5 Location: 16531-17047 bp Feature: gene Location: 17054-18424 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17282-17888 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 172 82 -17888 bp Feature: gene Location: 18505-18837 bp Feature: gene Location: 18862-19941 bp Feature: domain Description: Peptidase_S74 Location: 19567-19714 bp Feature: domain Description: Peptidase_S74 Location: 19567-19714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)