myRT

myRT report for GCA_009709955.1_ASM970995v1

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Seq: WCFC01000006.1 Escherichia coli strain SE52 contig00006, whole genome shotgun sequence (303198 bp)
Overview 1 RT 1: 300499-302272 bp Neighborhood of RT #1 [300499, 303063] RVT-UG7 Feature: gene Location: 300499-300639 bp Feature: gene Location: 300749-301489 bp Feature: gene Location: 301486-303063 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 301843-302272 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 301 843-302272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: WCFC01000024.1 Escherichia coli strain SE52 contig00024, whole genome shotgun sequence (54457 bp)
Overview 1 RT 1: 1273-5155 bp Neighborhood of RT #1 [1273, 5160] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 1273-1989 bp Feature: domain Description: rph Location: 1276-1984 bp Feature: domain Description: rph Location: 12 76-1984 bp Feature: gene Location: 2040-2696 bp Feature: domain Description: pyrE Location: 2058-2691 bp Feature: domain Description: pyrE Location: 2 058-2 691 bp Feature: gene Location: 2994-3953 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3129-3678 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 312 9-3678 bp Feature: gene Location: 3999-4595 bp Feature: domain Description: slmA Location: 4005-4581 bp Feature: domain Description: slmA Location: 4005-4581 bp Feature: gene Location: 4702-5160 bp Feature: domain Description: dut Location: 4708-5155 bp Feature: domain Description: dut Location: 4708-5155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: WCFC01000075.1 Escherichia coli strain SE52 contig00075, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)