myRT

myRT report for GCA_009710205.1_ASM971020v1

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Seq: WMIU01000140.1 Klebsiella pneumoniae strain RADAR37 NODE_140_length_255_cov_122.835938, whole genome shotgun sequence (255 bp)
Overview 1 RT 1: 3-252 bp Neighborhood of RT #1 [3, 254] RVT-GII Feature: gene Location: 3-254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WMIU01000146.1 Klebsiella pneumoniae strain RADAR37 NODE_146_length_255_cov_65.453125, whole genome shotgun sequence (255 bp)
Overview 1 RT 1: 3-252 bp Neighborhood of RT #1 [3, 254] RVT-GII Feature: gene Location: 3-254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-2 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WMIU01000015.1 Klebsiella pneumoniae strain RADAR37 NODE_15_length_141372_cov_62.104152, whole genome shotgun sequence (141372 bp)
Overview 1 RT 1: 34480-41581 bp Neighborhood of RT #1 [34480, 41581] HTH_23 Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 34480-34956 bp Feature: domain Description: HTH_23 Location: 34558-34699 bp Feature: domain Description: HTH_23 Location: 3 4558-3 4699 bp Feature: gene Location: 35377-36246 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 35899-36070 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 3 5899-3 6070 bp Feature: gene Location: 36902-38002 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37082-37616 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 7082-3 7616 bp Feature: gene Location: 38117-40393 bp Feature: domain Description: AAA_15 Location: 38150-39158 bp Feature: domain Description: AAA_15 Location: 3 8150-3 9158 bp Feature: gene Location: 41276-41581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: WMIU01000023.1 Klebsiella pneumoniae strain RADAR37 NODE_23_length_77526_cov_65.723614, whole genome shotgun sequence (77526 bp)
Overview 1 RT 1: 48836-51910 bp Neighborhood of RT #1 [48836, 51915] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 48836-49054 bp Feature: domain Description: PRK09678 Location: 48839-49037 bp Feature: domain Description: PRK09678 Location: 4 8839-4 9037 bp Feature: gene Location: 49301-49489 bp Feature: gene Location: 49458-50231 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 49593-50046 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4 9593-5004 6 bp Feature: gene Location: 50846-51328 bp Feature: domain Description: SmpB Location: 50876-51320 bp Feature: domain Description: SmpB Location: 50876-51320 bp Feature: gene Location: 51439-51915 bp Feature: domain Description: PRK10724 Location: 51445-51910 bp Feature: domain Description: PRK10724 Location: 514 4 5-51910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: WMIU01000046.1 Klebsiella pneumoniae strain RADAR37 NODE_46_length_9829_cov_69.203772, whole genome shotgun sequence (9829 bp)
Overview 1 RT 1: 4566-8937 bp Neighborhood of RT #1 [4566, 9053] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 4566-4868 bp Feature: domain Description: InsE Location: 4575-4857 bp Feature: domain Description: InsE Location: 45 75 -485 7 bp Feature: gene Location: 4895-5320 bp Feature: domain Description: PHA02517 Location: 4919-5255 bp Feature: domain Description: PHA025 17 Location: 4919-5 25 5 bp Feature: gene Location: 5912-7435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6185-6917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6185 -6917 bp Feature: domain Description: GIIM Note: maturase Location: 6992-7190 bp Feature: domain Description: GIIM Note: maturase Location: 6992-7190 bp Feature: gene Location: 7600-7758 bp Feature: domain Description: PHA02517 Location: 7603-7723 bp Feature: domain Description: PHA025 17 Location: 7603-7723 bp Feature: gene Location: 7977-9053 bp Feature: domain Description: COG3547 Location: 8016-8937 bp Feature: domain Description: COG35 47 Location: 8016-8937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: WMIU01000082.1 Klebsiella pneumoniae strain RADAR37 NODE_82_length_981_cov_182.943794, whole genome shotgun sequence (981 bp)
Overview 1 RT 1: 3-980 bp Neighborhood of RT #1 [3, 980] RVT-GII Feature: gene Location: 3-632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-6 33 bp Feature: gene Location: 789-980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WMIU01000087.1 Klebsiella pneumoniae strain RADAR37 NODE_87_length_912_cov_189.080255, whole genome shotgun sequence (912 bp)
Overview 1 RT 1: 1-460 bp Neighborhood of RT #1 [1, 852] RVT-GII Feature: gene Location: 1-852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII