myRT

myRT report for GCA_009710355.1_ASM971035v1

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Seq: WMJC01000015.1 Klebsiella pneumoniae strain RADAR77 NODE_15_length_36484_cov_23.271447, whole genome shotgun sequence (36484 bp)
Overview 1 RT 1: 12122-15238 bp Neighborhood of RT #1 [12122, 15238] PRK10276 RVT-GII Feature: gene Location: 12122-12547 bp Feature: domain Description: PRK10276 Location: 12125-12533 bp Feature: domain Description: PRK1 0276 Location: 1 21 25-1 2533 bp Feature: gene Location: 12741-12953 bp Feature: gene Location: 13028-14437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13355-14045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3355-1 4045 bp Feature: gene Location: 14353-14901 bp Feature: gene Location: 14960-15238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: WMJC01000004.1 Klebsiella pneumoniae strain RADAR77 NODE_4_length_776983_cov_39.668165, whole genome shotgun sequence (776983 bp)
Overview 1 RT 1: 267326-274512 bp 2 RT 2: 727089-733817 bp Neighborhood of RT #1 [267326, 274512] FimC FimD RVT-UG4 EAL Neighborhood of RT #2 [727089, 733858] HTH_XRE RVT-Retrons COG3440 Feature: gene Location: 267326-268054 bp Feature: domain Description: FimC Location: 267374-268037 bp Feature: domain Description: FimC Location: 2 67374-2 68037 bp Feature: gene Location: 268086-270695 bp Feature: domain Description: FimD Location: 268143-270684 bp Feature: domain Description: FimD Location: 2 68143-2 70684 bp Feature: gene Location: 270695-272725 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 271103-271547 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 71103-2 71547 bp Feature: gene Location: 273362-274216 bp Feature: domain Description: EAL Location: 274046-274199 bp Feature: domain Description: EAL Location: 2 74046-2 74199 bp Feature: gene Location: 274306-274512 bp Feature: gene Location: 727089-727415 bp Feature: gene Location: 727467-727757 bp Feature: domain Description: HTH_XRE Location: 727479-727644 bp Feature: domain Description: HTH_XRE Location: 72 7479-72 7644 bp Feature: gene Location: 727792-728709 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 727888-728455 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72 7888-72 8455 bp Feature: gene Location: 728750-732601 bp Feature: gene Location: 732800-733858 bp Feature: domain Description: COG3440 Location: 733430-733817 bp Feature: domain Description: COG3440 Location: 733430-733817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052), HTH_XRE (smart00530), RVT-Retrons, COG3440 (Predicted restriction endonuclease )