myRT

myRT report for GCA_009710385.1_ASM971038v1

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Seq: WMJF01000036.1 Klebsiella pneumoniae strain RADAR23 NODE_36_length_20183_cov_28.585860, whole genome shotgun sequence (20183 bp)
Overview 1 RT 1: 9261-14286 bp Neighborhood of RT #1 [9261, 14291] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 9261-10532 bp Feature: domain Description: umuC Location: 9264-10524 bp Feature: domain Description: umuC Location: 9264-1 0524 bp Feature: gene Location: 10532-11215 bp Feature: domain Description: PRK10276 Location: 10835-11198 bp Feature: domain Description: PRK1 0276 Location: 1 0835-1 1 1 98 bp Feature: gene Location: 11369-12856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11774-12464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 774-1 2464 bp Feature: gene Location: 12925-13194 bp Feature: gene Location: 13326-14291 bp Feature: domain Description: ArdC Location: 13452-14286 bp Feature: domain Description: ArdC Location: 1 3452-1 4286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227), umuC (PRK03609)

Seq: WMJF01000042.1 Klebsiella pneumoniae strain RADAR23 NODE_42_length_10636_cov_28.664002, whole genome shotgun sequence (10636 bp)
Overview 1 RT 1: 777-4870 bp Neighborhood of RT #1 [777, 4935] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 777-1853 bp Feature: domain Description: COG3547 Location: 816-1737 bp Feature: domain Description: COG3547 Location: 816-1737 bp Feature: gene Location: 2102-2308 bp Feature: gene Location: 2395-3918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2668-3400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 668-3400 bp Feature: domain Description: GIIM Note: maturase Location: 3475-3673 bp Feature: domain Description: GIIM Note: maturase Location: 3475-3673 bp Feature: gene Location: 3872-4297 bp Feature: gene Location: 4510-4935 bp Feature: domain Description: PHA02517 Location: 4534-4870 bp Feature: domain Description: PHA02 517 Location: 4534-4870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase )

Seq: WMJF01000009.1 Klebsiella pneumoniae strain RADAR23 NODE_9_length_230755_cov_23.022022, whole genome shotgun sequence (230755 bp)
Overview 1 RT 1: 123863-130964 bp Neighborhood of RT #1 [123863, 130964] HTH_23 Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 123863-124339 bp Feature: domain Description: HTH_23 Location: 123941-124082 bp Feature: domain Description: HTH_23 Location: 123 941-124082 bp Feature: gene Location: 124760-125629 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 125282-125453 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 125282-125453 bp Feature: gene Location: 126285-127385 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126468-126996 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126468-126996 bp Feature: gene Location: 127500-129776 bp Feature: domain Description: AAA_15 Location: 127533-128541 bp Feature: domain Description: AAA_15 Location: 12753 3 -128541 bp Feature: gene Location: 130659-130964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)