myRT

myRT report for GCA_009710565.1_ASM971056v1

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Seq: WMJN01000016.1 Klebsiella pneumoniae strain RADAR68 NODE_16_length_104518_cov_94.176873, whole genome shotgun sequence (104518 bp)
Overview 1 RT 1: 19206-25903 bp Neighborhood of RT #1 [19206, 25903] COG3440 RVT-Retrons HTH_XRE Feature: gene Location: 19206-20279 bp Feature: domain Description: COG3440 Location: 19851-20238 bp Feature: domain Description: COG3440 Location: 1 9851 -20238 bp Feature: gene Location: 20478-24329 bp Feature: gene Location: 24370-25287 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24466-25033 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24466-25033 bp Feature: gene Location: 25322-25612 bp Feature: domain Description: HTH_XRE Location: 25334-25499 bp Feature: domain Description: HTH_XRE Location: 25334-25499 bp Feature: gene Location: 25664-25903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3440 (Predicted restriction endonuclease ), RVT-Retrons, HTH_XRE (smart00530)

Seq: WMJN01000071.1 Klebsiella pneumoniae strain RADAR68 NODE_71_length_12673_cov_157.822573, whole genome shotgun sequence (12673 bp)
Overview 1 RT 1: 2-3059 bp Neighborhood of RT #1 [2, 3073] RVT-GII PRK10276 Feature: gene Location: 2-235 bp Feature: gene Location: 294-524 bp Feature: gene Location: 758-2245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163-1853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163-1853 bp Feature: gene Location: 2251-2418 bp Feature: gene Location: 2648-3073 bp Feature: domain Description: PRK10276 Location: 2651-3059 bp Feature: domain Description: PRK102 76 Location: 2 651-3059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: WMJN01000009.1 Klebsiella pneumoniae strain RADAR68 NODE_9_length_144985_cov_51.942627, whole genome shotgun sequence (144985 bp)
Overview 1 RT 1: 89784-96970 bp Neighborhood of RT #1 [89784, 96970] FimC FimD RVT-UG4 EAL Feature: gene Location: 89784-90512 bp Feature: domain Description: FimC Location: 89832-90495 bp Feature: domain Description: FimC Location: 8983 2-90495 bp Feature: gene Location: 90544-93153 bp Feature: domain Description: FimD Location: 90601-93142 bp Feature: domain Description: FimD Location: 90601-93 142 bp Feature: gene Location: 93153-95183 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 93561-94005 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 93 561-94005 bp Feature: gene Location: 95820-96674 bp Feature: domain Description: EAL Location: 96504-96657 bp Feature: domain Description: EAL Location: 96504-96657 bp Feature: gene Location: 96764-96970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)