myRT

myRT report for GCA_009710645.1_ASM971064v1

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Seq: WMJQ01000118.1 Klebsiella pneumoniae strain RADAR32 NODE_118_length_889_cov_502.708661, whole genome shotgun sequence (889 bp)
Overview 1 RT 1: 3-886 bp Neighborhood of RT #1 [3, 886] RVT-GII Feature: gene Location: 3-485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-486 bp Feature: gene Location: 632-886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WMJQ01000124.1 Klebsiella pneumoniae strain RADAR32 NODE_124_length_806_cov_495.726068, whole genome shotgun sequence (806 bp)
Overview 1 RT 1: 3-399 bp Neighborhood of RT #1 [3, 791] RVT-GII Feature: gene Location: 3-791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WMJQ01000189.1 Klebsiella pneumoniae strain RADAR32 NODE_189_length_316_cov_155.174603, whole genome shotgun sequence (316 bp)
Overview 1 RT 1: 3-315 bp Neighborhood of RT #1 [3, 314] RVT-GII Feature: gene Location: 3-314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-3 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WMJQ01000194.1 Klebsiella pneumoniae strain RADAR32 NODE_194_length_301_cov_127.626437, whole genome shotgun sequence (301 bp)
Overview 1 RT 1: 3-300 bp Neighborhood of RT #1 [3, 299] RVT-GII Feature: gene Location: 3-299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WMJQ01000228.1 Klebsiella pneumoniae strain RADAR32 NODE_228_length_255_cov_265.593750, whole genome shotgun sequence (255 bp)
Overview 1 RT 1: 2-251 bp Neighborhood of RT #1 [2, 253] RVT-GII Feature: gene Location: 2-253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -25 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WMJQ01000028.1 Klebsiella pneumoniae strain RADAR32 NODE_28_length_40252_cov_59.978318, whole genome shotgun sequence (40252 bp)
Overview 1 RT 1: 7425-12039 bp Neighborhood of RT #1 [7425, 12077] TIGR02646 COG3950 RVT-Retrons PRK09692 Feature: gene Location: 7425-8054 bp Feature: domain Description: TIGR02646 Location: 7515-7890 bp Feature: domain Description: TIGR026 46 Location: 7515-7890 bp Feature: gene Location: 8051-9643 bp Feature: domain Description: COG3950 Location: 8231-9452 bp Feature: domain Description: COG3950 Location: 8231-9452 bp Feature: gene Location: 9621-10586 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9729-10326 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9729-10326 bp Feature: gene Location: 11012-11653 bp Feature: gene Location: 11655-12077 bp Feature: domain Description: PRK09692 Location: 11658-12039 bp Feature: domain Description: PRK096 92 Location: 116 58-12039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons

Seq: WMJQ01000047.1 Klebsiella pneumoniae strain RADAR32 NODE_47_length_14102_cov_67.061038, whole genome shotgun sequence (14102 bp)
Overview 1 RT 1: 10252-14012 bp Neighborhood of RT #1 [10252, 14047] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 10252-10572 bp Feature: gene Location: 11181-11609 bp Feature: domain Description: PHA02517 Location: 11205-11544 bp Feature: domain Description: PHA02517 Location: 11205-11544 bp Feature: gene Location: 12201-13724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12474-13206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247 4-13206 bp Feature: domain Description: GIIM Note: maturase Location: 13281-13479 bp Feature: domain Description: GIIM Note: maturase Location: 13281-1347 9 bp Feature: gene Location: 13847-14047 bp Feature: domain Description: PHA02517 Location: 13850-14012 bp Feature: domain Description: PHA02517 Location: 13850-14012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)