myRT

myRT report for GCA_009710685.1_ASM971068v1

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Seq: WMJT01000001.1 Klebsiella pneumoniae strain RADAR29 contig00001, whole genome shotgun sequence (394924 bp)
Overview 1 RT 1: 25643-29899 bp Neighborhood of RT #1 [25643, 29913] PRK10724 SmpB RVT-UG11 D Feature: gene Location: 25643-26080 bp Feature: domain Description: PRK10724 Location: 25646-26075 bp Feature: domain Description: PRK1 0724 Location: 25646-26075 bp Feature: gene Location: 26230-26712 bp Feature: domain Description: SmpB Location: 26260-26704 bp Feature: domain Description: SmpB Location: 26260-26704 bp Feature: gene Location: 27327-27626 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27330-27441 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 27330-27441 bp Feature: gene Location: 28069-28257 bp Feature: gene Location: 28813-29913 bp Feature: domain Description: D Location: 28819-29899 bp Feature: domain Description: D Location: 2881 9-29899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, D (PHA02561)

Seq: WMJT01000018.1 Klebsiella pneumoniae strain RADAR29 contig00018, whole genome shotgun sequence (105844 bp)
Overview 1 RT 1: 1551-8003 bp Neighborhood of RT #1 [1551, 8003] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 1551-1802 bp Feature: gene Location: 1832-2668 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2321-2492 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 32 1-2 492 bp Feature: gene Location: 3324-4424 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3504-4038 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3504-4038 bp Feature: gene Location: 4539-6785 bp Feature: domain Description: AAA_15 Location: 4542-5550 bp Feature: domain Description: AAA_15 Location: 4542 -5550 bp Feature: gene Location: 7698-8003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: WMJT01000045.1 Klebsiella pneumoniae strain RADAR29 contig00045, whole genome shotgun sequence (9746 bp)
Overview 1 RT 1: 1-3980 bp Neighborhood of RT #1 [1, 4045] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 1-963 bp Feature: domain Description: COG3547 Location: 40-952 bp Feature: domain Description: COG3 547 Location: 40-952 bp Feature: gene Location: 1212-1418 bp Feature: gene Location: 1505-3028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778-2510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778-2510 bp Feature: domain Description: GIIM Note: maturase Location: 2585-2783 bp Feature: domain Description: GIIM Note: maturase Location: 2585-2783 bp Feature: gene Location: 2982-3407 bp Feature: gene Location: 3620-4045 bp Feature: domain Description: PHA02517 Location: 3644-3980 bp Feature: domain Description: PHA02517 Location: 3 644-3 980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: WMJT01000067.1 Klebsiella pneumoniae strain RADAR29 contig00067, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 66-1156 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII