myRT

myRT report for GCA_009710765.1_ASM971076v1

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Seq: WMJV01000035.1 Klebsiella pneumoniae strain RADAR22 NODE_35_length_20183_cov_31.282010, whole genome shotgun sequence (20183 bp)
Overview 1 RT 1: 9261-14286 bp Neighborhood of RT #1 [9261, 14291] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 9261-10532 bp Feature: domain Description: umuC Location: 9264-10524 bp Feature: domain Description: umuC Location: 9264-1 0524 bp Feature: gene Location: 10532-11215 bp Feature: domain Description: PRK10276 Location: 10835-11198 bp Feature: domain Description: PRK1 0276 Location: 1 0835-1 1 1 98 bp Feature: gene Location: 11369-12856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11774-12464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 774-1 2464 bp Feature: gene Location: 12925-13194 bp Feature: gene Location: 13326-14291 bp Feature: domain Description: ArdC Location: 13452-14286 bp Feature: domain Description: ArdC Location: 1 3452-1 4286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227), umuC (PRK03609)

Seq: WMJV01000041.1 Klebsiella pneumoniae strain RADAR22 NODE_41_length_10636_cov_31.369112, whole genome shotgun sequence (10636 bp)
Overview 1 RT 1: 777-4870 bp Neighborhood of RT #1 [777, 4935] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 777-1853 bp Feature: domain Description: COG3547 Location: 816-1737 bp Feature: domain Description: COG3547 Location: 816-1737 bp Feature: gene Location: 2102-2308 bp Feature: gene Location: 2395-3918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2668-3400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 668-3400 bp Feature: domain Description: GIIM Note: maturase Location: 3475-3673 bp Feature: domain Description: GIIM Note: maturase Location: 3475-3673 bp Feature: gene Location: 3872-4297 bp Feature: gene Location: 4510-4935 bp Feature: domain Description: PHA02517 Location: 4534-4870 bp Feature: domain Description: PHA02 517 Location: 4534-4870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase )

Seq: WMJV01000007.1 Klebsiella pneumoniae strain RADAR22 NODE_7_length_228903_cov_20.410589, whole genome shotgun sequence (228903 bp)
Overview 1 RT 1: 97940-104784 bp Neighborhood of RT #1 [97940, 105041] AAA_15 RVT-Retrons Nuc_deoxyrib_tr HTH_23 Feature: gene Location: 97940-98245 bp Feature: gene Location: 99128-101404 bp Feature: domain Description: AAA_15 Location: 99161-100169 bp Feature: domain Description: AAA_15 Location: 99161-100169 bp Feature: gene Location: 101519-102619 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101702-102230 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101702-10223 0 bp Feature: gene Location: 103275-104144 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 103797-103968 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 103 797-103 968 bp Feature: gene Location: 104565-105041 bp Feature: domain Description: HTH_23 Location: 104643-104784 bp Feature: domain Description: HTH_23 Location: 104643 -104784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), HTH_23 (pfam13384), AAA_15 (pfam13175)