myRT

myRT report for GCA_009711595.1_ASM971159v1

Download annotations/find similar RTs

Seq: VENM01000019.1 Firmicutes bacterium isolate MES9 c_000000000029, whole genome shotgun sequence (329383 bp)
Overview 1 RT 1: 325657-329035 bp Neighborhood of RT #1 [325657, 329082] AraC YdeE RVT-GII TIGR04076 Feature: gene Location: 325657-326145 bp Feature: gene Location: 326171-327031 bp Feature: domain Description: AraC Location: 326189-326507 bp Feature: domain Description: AraC Location: 3261 89-326507 bp Feature: domain Description: YdeE Location: 326558-327026 bp Feature: domain Description: YdeE Location: 326558-327026 bp Feature: gene Location: 327489-327995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327537-327981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327537-327981 bp Feature: gene Location: 328735-329082 bp Feature: domain Description: TIGR04076 Location: 328771-329035 bp Feature: domain Description: TIGR04076 Location: 328771 -329035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), YdeE (COG3708), RVT-GII, TIGR04076 (TIGR04076 family protein)

Seq: VENM01000006.1 Firmicutes bacterium isolate MES9 c_000000000247, whole genome shotgun sequence (81896 bp)
Overview 1 RT 1: 73844-76706 bp Neighborhood of RT #1 [73844, 76738] HTH_Tnp_1 PHA02517 RVT-GII InsE PHA02517 Feature: gene Location: 73844-74131 bp Feature: domain Description: HTH_Tnp_1 Location: 73856-74063 bp Feature: domain Description: HTH_Tnp_1 Location: 73856-74063 bp Feature: gene Location: 74185-74841 bp Feature: domain Description: PHA02517 Location: 74209-74803 bp Feature: domain Description: PHA02 517 Location: 742 09-74803 bp Feature: gene Location: 75025-75444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75085-75370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75085-75370 bp Feature: gene Location: 75565-75828 bp Feature: domain Description: InsE Location: 75574-75814 bp Feature: domain Description: InsE Location: 75574-75814 bp Feature: gene Location: 75848-76738 bp Feature: domain Description: PHA02517 Location: 76001-76706 bp Feature: domain Description: PHA02 517 Location: 76001-76706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, InsE (COG2963)

Seq: VENM01000013.1 Firmicutes bacterium isolate MES9 c_000000000640, whole genome shotgun sequence (21155 bp)
Overview 1 RT 1: 1-2859 bp Neighborhood of RT #1 [1, 2867] RVT-GII RVT-GII RhtB Feature: gene Location: 1-177 bp Feature: gene Location: 260-859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263 -668 bp Feature: gene Location: 981-1427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-1425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-1425 bp Feature: gene Location: 1823-1957 bp Feature: gene Location: 2253-2867 bp Feature: domain Description: RhtB Location: 2268-2859 bp Feature: domain Description: RhtB Location: 2268-2859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RhtB (COG1280)

Seq: VENM01000035.1 Firmicutes bacterium isolate MES9 c_000000000682, whole genome shotgun sequence (18420 bp)
Overview 1 RT 1: 16152-18286 bp Neighborhood of RT #1 [16152, 18300] Tyw1 GIIM RVT-GII Feature: gene Location: 16152-16835 bp Feature: domain Description: Tyw1 Location: 16206-16809 bp Feature: domain Description: Tyw1 Location: 16206-16809 bp Feature: gene Location: 17197-17475 bp Feature: domain Description: GIIM Note: maturase Location: 17203-17401 bp Feature: domain Description: GIIM Note: maturase Location: 17203-174 01 bp Feature: gene Location: 17689-18300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17944-18286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1794 4 -18286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tyw1 (COG0731), GIIM (pfam08388), RVT-GII

Seq: VENM01000034.1 Firmicutes bacterium isolate MES9 c_000000000773, whole genome shotgun sequence (13749 bp)
Overview 1 RT 1: 2402-7695 bp Neighborhood of RT #1 [2402, 7730] SIR2-like TPR TPR YdiL RVT-GII RhtB Feature: gene Location: 2402-5494 bp Feature: domain Description: SIR2-like Location: 2498-3122 bp Feature: domain Description: SIR2-like Location: 2498-3122 bp Feature: domain Description: TPR Location: 4412-4616 bp Feature: domain Description: TPR Location: 4412-4616 bp Feature: domain Description: TPR Location: 4856-5237 bp Feature: domain Description: TPR Location: 485 6-5 237 bp Feature: gene Location: 5896-6498 bp Feature: domain Description: YdiL Location: 5932-6490 bp Feature: domain Description: YdiL Location: 5 932-6490 bp Feature: gene Location: 6933-7118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6987-7092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6987-7092 bp Feature: gene Location: 7284-7445 bp Feature: gene Location: 7536-7730 bp Feature: domain Description: RhtB Location: 7548-7695 bp Feature: domain Description: RhtB Location: 75 48-7695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2-like (cd01406), TPR (smart00028), YdiL (COG1266), RVT-GII, RhtB (COG1280)