myRT

myRT report for GCA_009711705.1_ASM971170v1

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Seq: VENG01000001.1 Firmicutes bacterium isolate MES3 c_000000000014, whole genome shotgun sequence (466742 bp)
Overview 1 RT 1: 454616-457213 bp Neighborhood of RT #1 [454616, 457446] Avd_like RVT-DGRs PGRP Feature: gene Location: 454616-454981 bp Feature: domain Description: Avd_like Location: 454667-454970 bp Feature: domain Description: Avd_like Location: 454667-454970 bp Feature: gene Location: 455005-455217 bp Feature: gene Location: 455298-456344 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 455520-456138 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 455520-4561 38 bp Feature: gene Location: 456360-456773 bp Feature: gene Location: 456760-457446 bp Feature: domain Description: PGRP Location: 456832-457213 bp Feature: domain Description: PGRP Location: 456832-45721 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, PGRP (smart00701)

Seq: VENG01000012.1 Firmicutes bacterium isolate MES3 c_000000000137, whole genome shotgun sequence (142740 bp)
Overview 1 RT 1: 136730-141234 bp Neighborhood of RT #1 [136730, 141296] RVT_N RVT-GII GIIM HNHc VOC_like Feature: gene Location: 136730-137659 bp Feature: gene Location: 137978-138142 bp Feature: gene Location: 138375-139634 bp Feature: domain Description: RVT_N Location: 138429-138675 bp Feature: domain Description: RVT_N Location: 13842 9-138675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138729-139389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13872 9-139389 bp Feature: domain Description: GIIM Note: maturase Location: 139452-139587 bp Feature: domain Description: GIIM Note: maturase Location: 139452 -139587 bp Feature: gene Location: 139761-140153 bp Feature: domain Description: HNHc Note: nucleases Location: 139893-140043 bp Feature: domain Description: HNHc Note: nucleases Location: 139893-140043 bp Feature: gene Location: 140862-141296 bp Feature: domain Description: VOC_like Location: 140874-141234 bp Feature: domain Description: VOC_like Location: 140874-1412 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), VOC_like (cd16355)

Seq: VENG01000029.1 Firmicutes bacterium isolate MES3 c_000000000227, whole genome shotgun sequence (91823 bp)
Overview 1 RT 1: 99-2069 bp Neighborhood of RT #1 [99, 2069] RVT-GII Feature: gene Location: 99-842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 6-816 bp Feature: gene Location: 1116-1424 bp Feature: gene Location: 1677-2069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VENG01000019.1 Firmicutes bacterium isolate MES3 c_000000000306, whole genome shotgun sequence (67352 bp)
Overview 1 RT 1: 50431-57739 bp Neighborhood of RT #1 [50431, 57739] RAMA RVT-UG12 BRR2 BRR2 Feature: gene Location: 50431-50571 bp Feature: gene Location: 50599-51318 bp Feature: domain Description: RAMA Location: 51034-51307 bp Feature: domain Description: RAMA Location: 51034 -51307 bp Feature: gene Location: 51293-52639 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 51308-51704 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 51308-51704 bp Feature: gene Location: 53161-56781 bp Feature: domain Description: BRR2 Location: 54022-54466 bp Feature: domain Description: BRR2 Location: 54 022-54 4 66 bp Feature: domain Description: BRR2 Location: 55069-55414 bp Feature: domain Description: BRR2 Location: 55069-554 14 bp Feature: gene Location: 56783-57739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAMA (pfam18755), RVT-UG12, BRR2 (COG1204)

Seq: VENG01000040.1 Firmicutes bacterium isolate MES3 c_000000000460, whole genome shotgun sequence (39351 bp)
Overview 1 RT 1: 5104-9007 bp Neighborhood of RT #1 [5104, 9007] RVT_N RVT-GII GIIM HNH MnuA_DNase1-like Feature: gene Location: 5104-5517 bp Feature: gene Location: 5427-5591 bp Feature: gene Location: 5826-7604 bp Feature: domain Description: RVT_N Location: 5880-6126 bp Feature: domain Description: RVT_N Location: 5 880-6126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6180-6840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6180-6840 bp Feature: domain Description: GIIM Note: maturase Location: 6903-7137 bp Feature: domain Description: GIIM Note: maturase Location: 6903-7137 bp Feature: domain Description: HNH Note: nucleases Location: 7374-7509 bp Feature: domain Description: HNH Note: nucleases Location: 7374-75 09 bp Feature: gene Location: 7889-8554 bp Feature: domain Description: MnuA_DNase1-like Location: 8006-8549 bp Feature: domain Description: MnuA_DNase1-like Location: 8006-85 49 bp Feature: gene Location: 8567-9007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), MnuA_DNase1-like (cd10283)

Seq: VENG01000022.1 Firmicutes bacterium isolate MES3 c_000000000822, whole genome shotgun sequence (12103 bp)
Overview 1 RT 1: 9973-12102 bp Neighborhood of RT #1 [9973, 12102] SAPR RVT-GII GIIM Feature: gene Location: 9973-10407 bp Feature: domain Description: SAPR Location: 10075-10396 bp Feature: domain Description: SAPR Location: 10075-10396 bp Feature: gene Location: 10418-10708 bp Feature: gene Location: 11334-11894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11364-11496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1136 4-11496 bp Feature: domain Description: GIIM Note: maturase Location: 11598-11814 bp Feature: domain Description: GIIM Note: maturase Location: 11598-11814 bp Feature: gene Location: 11947-12102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SAPR (COG3947), RVT-GII, GIIM (pfam08388)