myRT

myRT report for GCA_009711925.1_ASM971192v1

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Seq: VIKY01000182.1 Dolichospermum sp. UHCC 0352 scaffold184_cov0, whole genome shotgun sequence (2172 bp)
Overview 1 RT 1: 61-2171 bp Neighborhood of RT #1 [61, 2171] RVT_N RVT-GII McrA Feature: gene Location: 61-1818 bp Feature: RT Description: RVT_N Location: 280-520 bp Feature: RT Description: RVT_N Location: 280-520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 577-1234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 577-1 234 bp Feature: domain Description: McrA Location: 1465-1789 bp Feature: domain Description: McrA Location: 1 465-1 789 bp Feature: gene Location: 1983-2171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: VIKY01000312.1 Dolichospermum sp. UHCC 0352 scaffold317_cov0, whole genome shotgun sequence (30016 bp)
Overview 1 RT 1: 22828-26126 bp Neighborhood of RT #1 [22828, 26134] RVT_N RVT-GII GIIM McrA RNR_II_monomer Feature: gene Location: 22828-22962 bp Feature: gene Location: 22996-23244 bp Feature: gene Location: 23389-25128 bp Feature: RT Description: RVT_N Location: 23431-23677 bp Feature: RT Description: RVT_N Location: 2 3431-2 3677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23719-24403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3719-2 4403 bp Feature: domain Description: GIIM Note: maturase Location: 24505-24736 bp Feature: domain Description: GIIM Note: maturase Location: 2 4505-2 4736 bp Feature: domain Description: McrA Location: 24832-25102 bp Feature: domain Description: McrA Location: 2 4832 -2 5102 bp Feature: gene Location: 25169-25420 bp Feature: gene Location: 25577-26134 bp Feature: domain Description: RNR_II_monomer Location: 25586-26126 bp Feature: domain Description: RNR_II_monomer Location: 2 5586-2 612 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), RNR_II_monomer (cd01676)

Seq: VIKY01000033.1 Dolichospermum sp. UHCC 0352 scaffold33_cov0, whole genome shotgun sequence (26105 bp)
Overview 1 RT 1: 1543-8621 bp Neighborhood of RT #1 [1543, 8626] CbpA TPR DUF1825 RVT_N RVT-GII GIIM MrcB PRK05912 Feature: gene Location: 1543-2469 bp Feature: domain Description: CbpA Location: 1588-1945 bp Feature: domain Description: CbpA Location: 1588-1945 bp Feature: domain Description: TPR Location: 2140-2371 bp Feature: domain Description: TPR Location: 2140-23 71 bp Feature: gene Location: 2634-2936 bp Feature: domain Description: DUF1825 Location: 2637-2928 bp Feature: domain Description: DUF1825 Location: 263 7-2928 bp Feature: gene Location: 3463-4947 bp Feature: RT Description: RVT_N Location: 3499-3745 bp Feature: RT Description: RVT_N Location: 3 499-3 745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3796-4453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 796-4453 bp Feature: domain Description: GIIM Note: maturase Location: 4510-4708 bp Feature: domain Description: GIIM Note: maturase Location: 4510-4708 bp Feature: gene Location: 5334-7256 bp Feature: domain Description: MrcB Location: 5433-7233 bp Feature: domain Description: MrcB Location: 543 3 -723 3 bp Feature: gene Location: 7397-8626 bp Feature: domain Description: PRK05912 Location: 7433-8621 bp Feature: domain Description: PRK05912 Location: 743 3 -8621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbpA (COG2214), TPR (smart00028), DUF1825 (pfam08855), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), MrcB (COG0744), PRK05912 (tyrosyl-tRNA synthetase; Validated)

Seq: VIKY01000007.1 Dolichospermum sp. UHCC 0352 scaffold7_cov0, whole genome shotgun sequence (81154 bp)
Overview 1 RT 1: 4222-9083 bp Neighborhood of RT #1 [4222, 9100] Tab2_like RVT_N RVT-GII McrA MPP_PPP_family YfgC Feature: gene Location: 4222-5019 bp Feature: domain Description: Tab2_like Location: 4237-5008 bp Feature: domain Description: Tab2_like Location: 4 237-5008 bp Feature: gene Location: 5119-5361 bp Feature: gene Location: 5572-7146 bp Feature: RT Description: RVT_N Location: 5608-5854 bp Feature: RT Description: RVT_N Location: 5608-5854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5905-6562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5905-6562 bp Feature: domain Description: McrA Location: 6793-7117 bp Feature: domain Description: McrA Location: 6793-7117 bp Feature: gene Location: 7475-8236 bp Feature: domain Description: MPP_PPP_family Location: 7502-7952 bp Feature: domain Description: MPP_PPP_family Location: 7502-7952 bp Feature: gene Location: 8237-9100 bp Feature: domain Description: YfgC Location: 8312-9083 bp Feature: domain Description: YfgC Location: 8312-9083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tab2_like, RVT_N (pfam13655), RVT-GII, McrA (COG4058), MPP_PPP_family (cd00144), YfgC (COG4783)