myRT

myRT report for GCA_009712035.1_ASM971203v1

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Seq: VILB01000013.1 Anabaena sp. UHCC 0187 scaffold13_cov2, whole genome shotgun sequence (780777 bp)
Overview 1 RT 1: 432601-435390 bp Neighborhood of RT #1 [432601, 435390] BrnA_antitoxin RVT_N RVT-GII McrA Feature: gene Location: 432601-432852 bp Feature: domain Description: BrnA_antitoxin Location: 432670-432832 bp Feature: domain Description: BrnA_antitoxin Location: 432670-432832 bp Feature: gene Location: 432928-433065 bp Feature: gene Location: 433178-434755 bp Feature: domain Description: RVT_N Location: 433214-433460 bp Feature: domain Description: RVT_N Location: 43321 4-433460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433511-434171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43351 1 -4341 71 bp Feature: domain Description: McrA Location: 434405-434726 bp Feature: domain Description: McrA Location: 434405-434726 bp Feature: gene Location: 434875-435093 bp Feature: gene Location: 435127-435390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BrnA_antitoxin (pfam14384), RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: VILB01000014.1 Anabaena sp. UHCC 0187 scaffold14_cov3, whole genome shotgun sequence (491489 bp)
Overview 1 RT 1: 423027-428193 bp 2 RT 2: 435283-439349 bp Neighborhood of RT #1 [423027, 428261] MmsB RVT_N RVT-GII McrA SSB NagA Neighborhood of RT #2 [435283, 439349] RsmB group_II_RT_mat RVT-UG19 COG5550 Feature: gene Location: 423027-423905 bp Feature: domain Description: MmsB Location: 423030-423876 bp Feature: domain Description: MmsB Location: 42 3030-42 3876 bp Feature: gene Location: 423968-424150 bp Feature: gene Location: 424278-425903 bp Feature: domain Description: RVT_N Location: 424314-424560 bp Feature: domain Description: RVT_N Location: 42 4314-42 4560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424611-425268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 4611-42 52 68 bp Feature: domain Description: McrA Location: 425502-425808 bp Feature: domain Description: McrA Location: 42 5502 -42 5808 bp Feature: gene Location: 426424-426804 bp Feature: domain Description: SSB Location: 426523-426772 bp Feature: domain Description: SSB Location: 42 652 3-42 6772 bp Feature: gene Location: 427098-428261 bp Feature: domain Description: NagA Location: 427143-428193 bp Feature: domain Description: NagA Location: 42 7143-42 8193 bp Feature: gene Location: 435283-435456 bp Feature: gene Location: 435465-436418 bp Feature: domain Description: RsmB Location: 435627-436350 bp Feature: domain Description: RsmB Location: 43562 7-436350 bp Feature: gene Location: 436482-438584 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 436620-436791 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 43662 0-436791 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 436869-437373 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 436869-437373 bp Feature: gene Location: 438634-438996 bp Feature: domain Description: COG5550 Location: 438637-438991 bp Feature: domain Description: COG5550 Location: 438637-438991 bp Feature: gene Location: 438993-439349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MmsB (COG2084), RVT_N (pfam13655), RVT-GII, McrA (COG4058), SSB (pfam00436), NagA (COG1820), RsmB (COG0144), group_II_RT_mat (TIGR04416), RVT-UG19, COG5550 (Predicted aspartyl protease )

Seq: VILB01000001.1 Anabaena sp. UHCC 0187 scaffold1_cov4, whole genome shotgun sequence (280107 bp)
Overview 1 RT 1: 190087-195160 bp Neighborhood of RT #1 [190087, 195171] PRK07413 RVT_N RVT-GII McrA PRK07413 YadD Feature: gene Location: 190087-190623 bp Feature: gene Location: 190910-191581 bp Feature: domain Description: PRK07413 Location: 190913-191573 bp Feature: domain Description: PRK07413 Location: 190913 -191573 bp Feature: gene Location: 192115-193689 bp Feature: domain Description: RVT_N Location: 192151-192391 bp Feature: domain Description: RVT_N Location: 192151-1923 91 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192448-193105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192448-193 105 bp Feature: domain Description: McrA Location: 193336-193660 bp Feature: domain Description: McrA Location: 193 3 3 6-193 660 bp Feature: gene Location: 193826-194257 bp Feature: domain Description: PRK07413 Location: 193829-194255 bp Feature: domain Description: PRK07413 Location: 193 829-194255 bp Feature: gene Location: 194347-195171 bp Feature: domain Description: YadD Location: 194350-195160 bp Feature: domain Description: YadD Location: 1943 50-195160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07413 (cob(I)yrinic acid a,c-diamide adenosyltransferase), RVT_N (pfam13655), RVT-GII, McrA (COG4058), YadD (COG5464)

Seq: VILB01000002.1 Anabaena sp. UHCC 0187 scaffold2_cov5, whole genome shotgun sequence (275925 bp)
Overview 1 RT 1: 250090-258540 bp Neighborhood of RT #1 [250090, 258554] NlpD SpoU-like_TrmL RVT_N RVT-GII McrA gshA_cyano REC BaeS Feature: gene Location: 250090-252468 bp Feature: domain Description: NlpD Location: 251050-252463 bp Feature: domain Description: NlpD Location: 251050-2524 63 bp Feature: gene Location: 253237-253698 bp Feature: domain Description: SpoU-like_TrmL Location: 253246-253684 bp Feature: domain Description: SpoU-like_TrmL Location: 25324 6-253684 bp Feature: gene Location: 253997-255568 bp Feature: domain Description: RVT_N Location: 254033-254279 bp Feature: domain Description: RVT_N Location: 254 033-254 279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 254330-254981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 254 330-254 981 bp Feature: domain Description: McrA Location: 255221-255539 bp Feature: domain Description: McrA Location: 255221-255539 bp Feature: gene Location: 256102-257280 bp Feature: domain Description: gshA_cyano Location: 256141-257260 bp Feature: domain Description: gshA_cyano Location: 25614 1-257260 bp Feature: gene Location: 257364-258554 bp Feature: domain Description: REC Location: 257382-257601 bp Feature: domain Description: REC Location: 257382-257601 bp Feature: domain Description: BaeS Location: 257640-258540 bp Feature: domain Description: BaeS Location: 25764 0-25854 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), SpoU-like_TrmL (cd18094), RVT_N (pfam13655), RVT-GII, McrA (COG4058), gshA_cyano (TIGR02048), REC (smart00448), BaeS (COG0642)

Seq: VILB01000009.1 Anabaena sp. UHCC 0187 scaffold9_cov12, whole genome shotgun sequence (139225 bp)
Overview 1 RT 1: 29200-36036 bp Neighborhood of RT #1 [29200, 36098] tol_pal_ybgF tol_pal_ybgF tol_pal_ybgF tol_pal_ybgF Slt70_like RVT_N RVT-GII GIIM McrA YgdD FtsW Feature: gene Location: 29200-31389 bp Feature: domain Description: tol_pal_ybgF Location: 29461-29686 bp Feature: domain Description: tol_pal_ybgF Location: 29461-29686 bp Feature: domain Description: tol_pal_ybgF Location: 29935-30100 bp Feature: domain Description: tol_pal_ybgF Location: 29935 -30100 bp Feature: domain Description: tol_pal_ybgF Location: 30133-30301 bp Feature: domain Description: tol_pal_ybgF Location: 30133-30301 bp Feature: domain Description: tol_pal_ybgF Location: 30319-30508 bp Feature: domain Description: tol_pal_ybgF Location: 30319-305 08 bp Feature: domain Description: Slt70_like Location: 30871-31315 bp Feature: domain Description: Slt70_like Location: 30871-31315 bp Feature: gene Location: 31648-32070 bp Feature: gene Location: 32605-34176 bp Feature: domain Description: RVT_N Location: 32641-32887 bp Feature: domain Description: RVT_N Location: 32641-32887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32938-33592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32938-335 92 bp Feature: domain Description: GIIM Note: maturase Location: 33649-33775 bp Feature: domain Description: GIIM Note: maturase Location: 33649-33775 bp Feature: domain Description: McrA Location: 33826-34147 bp Feature: domain Description: McrA Location: 33826-34147 bp Feature: gene Location: 34347-34727 bp Feature: domain Description: YgdD Location: 34353-34713 bp Feature: domain Description: YgdD Location: 3435 3-34713 bp Feature: gene Location: 34911-36098 bp Feature: domain Description: FtsW Location: 34974-36036 bp Feature: domain Description: FtsW Location: 34974-36036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tol_pal_ybgF (TIGR02795), Slt70_like, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), YgdD (COG2363), FtsW (COG0772)