myRT

myRT report for GCA_009712635.1_ASM971263v1

Download annotations/find similar RTs

Seq: WASS01000017.1 Hungatella sp. isolate SA7853_bin5 NODE_121_length_31440_cov_80.523084, whole genome shotgun sequence (31440 bp)
Overview 1 RT 1: 23474-28376 bp Neighborhood of RT #1 [23474, 28376] RAYT RVT-GII RAYT Feature: gene Location: 23474-24871 bp Feature: gene Location: 25306-25575 bp Feature: domain Description: RAYT Location: 25315-25561 bp Feature: domain Description: RAYT Location: 2531 5-25561 bp Feature: gene Location: 26082-27434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26367-27057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26367-27057 bp Feature: gene Location: 27522-27692 bp Feature: domain Description: RAYT Location: 27528-27663 bp Feature: domain Description: RAYT Location: 27528-27663 bp Feature: gene Location: 27810-28376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), RVT-GII

Seq: WASS01000015.1 Hungatella sp. isolate SA7853_bin5 NODE_3_length_921864_cov_51.388362, whole genome shotgun sequence (921864 bp)
Overview 1 RT 1: 43824-50962 bp 2 RT 2: 125910-128736 bp Neighborhood of RT #1 [43824, 50985] ManC DUF871 RVT-UG5 COG1606 DUF111 Neighborhood of RT #2 [125910, 128759] PRK00967 RVT-GII GIIM HTH_XRE SnoaL Feature: gene Location: 43824-44183 bp Feature: domain Description: ManC Location: 43914-44148 bp Feature: domain Description: ManC Location: 43914-44148 bp Feature: gene Location: 44229-45323 bp Feature: domain Description: DUF871 Location: 44238-45309 bp Feature: domain Description: DUF871 Location: 442 38-45309 bp Feature: gene Location: 45427-48558 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 45904-46354 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 45904-46354 bp Feature: gene Location: 48853-49674 bp Feature: domain Description: COG1606 Location: 48892-49657 bp Feature: domain Description: COG1606 Location: 48892 -49657 bp Feature: gene Location: 49681-50985 bp Feature: domain Description: DUF111 Location: 49696-50962 bp Feature: domain Description: DUF111 Location: 49696-50962 bp Feature: gene Location: 125910-126230 bp Feature: domain Description: PRK00967 Location: 125922-126225 bp Feature: domain Description: PRK00967 Location: 12 592 2 -12 62 2 5 bp Feature: gene Location: 126266-126475 bp Feature: gene Location: 126562-127422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126565-126982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 6565-12 6982 bp Feature: domain Description: GIIM Note: maturase Location: 127033-127261 bp Feature: domain Description: GIIM Note: maturase Location: 12 7033-12 72 61 bp Feature: gene Location: 127548-128132 bp Feature: domain Description: HTH_XRE Location: 127569-127737 bp Feature: domain Description: HTH_XRE Location: 12 7569-12 7737 bp Feature: gene Location: 128334-128759 bp Feature: domain Description: SnoaL Location: 128352-128736 bp Feature: domain Description: SnoaL Location: 12 8352 -12 8736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ManC (COG0662), DUF871 (pfam05913), RVT-UG5, COG1606 (ATP-utilizing enzyme, PP-loop superfamily ), DUF111 (pfam01969), PRK00967 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), SnoaL (pfam07366)