myRT

myRT report for GCA_009718165.1_ASM971816v1

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Seq: WMZY01000013.1 [Ruminococcus] torques strain BIOML-A7 scaffold13_size76724, whole genome shotgun sequence (76724 bp)
Overview 1 RT 1: 52619-55179 bp Neighborhood of RT #1 [52619, 55331] DnaD RVT-DGRs Avd_like GIY-YIG_SF Feature: gene Location: 52619-52750 bp Feature: gene Location: 52859-53365 bp Feature: domain Description: DnaD Location: 52949-53279 bp Feature: domain Description: DnaD Location: 52949-53279 bp Feature: gene Location: 53409-54479 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53649-54252 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53649-54252 bp Feature: gene Location: 54634-54804 bp Feature: domain Description: Avd_like Location: 54640-54790 bp Feature: domain Description: Avd_like Location: 54640-54790 bp Feature: gene Location: 54849-55331 bp Feature: domain Description: GIY-YIG_SF Location: 54945-55179 bp Feature: domain Description: GIY-YIG_SF Location: 54945-551 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaD (COG3935), RVT-DGRs, Avd_like (cd16376), GIY-YIG_SF (cl15257)

Seq: WMZY01000023.1 [Ruminococcus] torques strain BIOML-A7 scaffold23_size43594, whole genome shotgun sequence (43594 bp)
Overview 1 RT 1: 33339-37814 bp Neighborhood of RT #1 [33339, 37816] RVT-GII Gph PRK05755 Feature: gene Location: 33339-33518 bp Feature: gene Location: 33720-33863 bp Feature: gene Location: 33850-34305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34060-34180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34060-34180 bp Feature: gene Location: 34467-35111 bp Feature: domain Description: Gph Location: 34500-35100 bp Feature: domain Description: Gph Location: 34500-35100 bp Feature: gene Location: 35201-37816 bp Feature: domain Description: PRK05755 Location: 35210-37814 bp Feature: domain Description: PRK05755 Location: 352 10-37814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Gph (COG0546), PRK05755 (DNA polymerase I; Provisional)

Seq: WMZY01000024.1 [Ruminococcus] torques strain BIOML-A7 scaffold24_size42673, whole genome shotgun sequence (42673 bp)
Overview 1 RT 1: 6442-10048 bp Neighborhood of RT #1 [6442, 10050] RVT-DGRs Avd_like PHA00653 PHA00653 Feature: gene Location: 6442-6675 bp Feature: gene Location: 6726-7040 bp Feature: gene Location: 7112-8164 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7322-7937 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 73 22-793 7 bp Feature: gene Location: 8498-8896 bp Feature: domain Description: Avd_like Location: 8555-8852 bp Feature: domain Description: Avd_like Location: 8555-8852 bp Feature: gene Location: 8950-10050 bp Feature: domain Description: PHA00653 Location: 9073-9529 bp Feature: domain Description: PHA00653 Location: 9073 -9529 bp Feature: domain Description: PHA00653 Location: 9568-10048 bp Feature: domain Description: PHA00653 Location: 9568-10048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), PHA00653 (mtd;major tropism determinant)

Seq: WMZY01000002.1 [Ruminococcus] torques strain BIOML-A7 scaffold2_size168674, whole genome shotgun sequence (168785 bp)
Overview 1 RT 1: 93350-97735 bp Neighborhood of RT #1 [93350, 97737] FlgJ Phage_holin_4_1 RVT-DGRs Avd_like PHA00653 Feature: gene Location: 93350-94294 bp Feature: domain Description: FlgJ Location: 93368-93839 bp Feature: domain Description: FlgJ Location: 93368-93839 bp Feature: gene Location: 94298-94726 bp Feature: domain Description: Phage_holin_4_1 Location: 94352-94679 bp Feature: domain Description: Phage_holin_4 _1 Location: 94 352-94 679 bp Feature: gene Location: 94798-95838 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 95008-95623 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 95008-95623 bp Feature: gene Location: 96194-96583 bp Feature: domain Description: Avd_like Location: 96254-96557 bp Feature: domain Description: Avd_like Location: 96254 -96557 bp Feature: gene Location: 96643-97737 bp Feature: domain Description: PHA00653 Location: 96736-97735 bp Feature: domain Description: PHA00653 Location: 96736-97735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FlgJ (COG1705), Phage_holin_4_1 (pfam05105), RVT-DGRs, Avd_like (cd16376), PHA00653 (mtd;major tropism determinant)