myRT

myRT report for GCA_009718205.1_ASM971820v1

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Seq: WNAC01000022.1 [Ruminococcus] torques strain BIOML-A3 scaffold22_size43594, whole genome shotgun sequence (43594 bp)
Overview 1 RT 1: 33339-37814 bp Neighborhood of RT #1 [33339, 37816] RVT-GII Gph PRK05755 Feature: gene Location: 33339-33518 bp Feature: gene Location: 33720-33863 bp Feature: gene Location: 33850-34305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34060-34180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34060-341 80 bp Feature: gene Location: 34467-35111 bp Feature: domain Description: Gph Location: 34500-35100 bp Feature: domain Description: Gph Location: 34500-351 00 bp Feature: gene Location: 35201-37816 bp Feature: domain Description: PRK05755 Location: 35210-37814 bp Feature: domain Description: PRK05755 Location: 3521 0-3781 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Gph (COG0546), PRK05755 (DNA polymerase I; Provisional)

Seq: WNAC01000023.1 [Ruminococcus] torques strain BIOML-A3 scaffold23_size42673, whole genome shotgun sequence (42673 bp)
Overview 1 RT 1: 32624-36232 bp Neighborhood of RT #1 [32624, 36232] PHA00653 PHA00653 Avd_like RVT-DGRs Feature: gene Location: 32624-33724 bp Feature: domain Description: PHA00653 Location: 32747-33203 bp Feature: domain Description: PHA00653 Location: 32 747-332 03 bp Feature: domain Description: PHA00653 Location: 33242-33722 bp Feature: domain Description: PHA00653 Location: 332 42 -3372 2 bp Feature: gene Location: 33778-34176 bp Feature: domain Description: Avd_like Location: 33835-34132 bp Feature: domain Description: Avd_like Location: 33835-34132 bp Feature: gene Location: 34510-35562 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 34720-35335 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3472 0-35335 bp Feature: gene Location: 35634-35948 bp Feature: gene Location: 35999-36232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs

Seq: WNAC01000005.1 [Ruminococcus] torques strain BIOML-A3 scaffold5_size107226, whole genome shotgun sequence (107226 bp)
Overview 1 RT 1: 20716-22193 bp Neighborhood of RT #1 [20716, 22198] Phage_holin_5_2 RVT-UNC Phage_XkdX Feature: gene Location: 20716-21009 bp Feature: domain Description: Phage_holin_5_2 Location: 20761-20992 bp Feature: domain Description: Phage_holin_5_2 Location: 20761-20992 bp Feature: gene Location: 21022-21345 bp Feature: gene Location: 21364-21777 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 21373-21493 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 213 73 -21493 bp Feature: gene Location: 21774-22058 bp Feature: gene Location: 22055-22198 bp Feature: domain Description: Phage_XkdX Location: 22076-22193 bp Feature: domain Description: Phage_XkdX Location: 22076-22193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_5_2 (pfam16079), RVT-CRISPR/RVT-DGRs(RVT-UNC), Phage_XkdX (pfam09693)

Seq: WNAC01000006.1 [Ruminococcus] torques strain BIOML-A3 scaffold6_size189504, whole genome shotgun sequence (189504 bp)
Overview 1 RT 1: 99214-103146 bp Neighborhood of RT #1 [99214, 103349] PHA00653 Avd_like RVT-DGRs Phage_holin_4_1 FlgJ Feature: gene Location: 99214-100308 bp Feature: domain Description: PHA00653 Location: 99307-100306 bp Feature: domain Description: PHA00653 Location: 99307-100306 bp Feature: gene Location: 100368-100757 bp Feature: domain Description: Avd_like Location: 100428-100731 bp Feature: domain Description: Avd_like Location: 1004 28-100731 bp Feature: gene Location: 101113-102153 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 101323-101938 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 101323-101938 bp Feature: gene Location: 102225-102653 bp Feature: domain Description: Phage_holin_4_1 Location: 102279-102606 bp Feature: domain Description: Phage_holin_4 _1 Location: 102279-102606 bp Feature: gene Location: 102657-103349 bp Feature: domain Description: FlgJ Location: 102675-103146 bp Feature: domain Description: FlgJ Location: 102675-10314 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105), FlgJ (COG1705)

Seq: WNAC01000009.1 [Ruminococcus] torques strain BIOML-A3 scaffold9_size83718, whole genome shotgun sequence (83718 bp)
Overview 1 RT 1: 52577-55137 bp Neighborhood of RT #1 [52577, 55289] DnaD RVT-DGRs Avd_like GIY-YIG_SF Feature: gene Location: 52577-52708 bp Feature: gene Location: 52817-53323 bp Feature: domain Description: DnaD Location: 52907-53237 bp Feature: domain Description: DnaD Location: 5 2907-5 3237 bp Feature: gene Location: 53367-54437 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53607-54210 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 3607-5 4210 bp Feature: gene Location: 54592-54762 bp Feature: domain Description: Avd_like Location: 54598-54748 bp Feature: domain Description: Avd_like Location: 5 45 98-5 4748 bp Feature: gene Location: 54807-55289 bp Feature: domain Description: GIY-YIG_SF Location: 54903-55137 bp Feature: domain Description: GIY-YIG_SF Location: 5 4903-5 5 137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaD (COG3935), RVT-DGRs, Avd_like (cd16376), GIY-YIG_SF (cl15257)