myRT

myRT report for GCA_009718245.1_ASM971824v1

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Seq: WNAB01000022.1 [Ruminococcus] torques strain BIOML-A4 scaffold22_size43789, whole genome shotgun sequence (43789 bp)
Overview 1 RT 1: 33534-38009 bp Neighborhood of RT #1 [33534, 38011] RVT-GII Gph PRK05755 Feature: gene Location: 33534-33713 bp Feature: gene Location: 33915-34058 bp Feature: gene Location: 34045-34500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34255-34375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34255-34375 bp Feature: gene Location: 34662-35306 bp Feature: domain Description: Gph Location: 34695-35295 bp Feature: domain Description: Gph Location: 34695-35295 bp Feature: gene Location: 35396-38011 bp Feature: domain Description: PRK05755 Location: 35405-38009 bp Feature: domain Description: PRK05755 Location: 35405-38009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Gph (COG0546), PRK05755 (DNA polymerase I; Provisional)

Seq: WNAB01000023.1 [Ruminococcus] torques strain BIOML-A4 scaffold23_size40465, whole genome shotgun sequence (40465 bp)
Overview 1 RT 1: 30266-33874 bp Neighborhood of RT #1 [30266, 33874] PHA00653 PHA00653 Avd_like RVT-DGRs Feature: gene Location: 30266-31366 bp Feature: domain Description: PHA00653 Location: 30389-30845 bp Feature: domain Description: PHA00653 Location: 30389-30845 bp Feature: domain Description: PHA00653 Location: 30884-31364 bp Feature: domain Description: PHA00653 Location: 30884-31364 bp Feature: gene Location: 31420-31818 bp Feature: domain Description: Avd_like Location: 31477-31774 bp Feature: domain Description: Avd_like Location: 31477-31774 bp Feature: gene Location: 32152-33204 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32362-32977 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32 362 -32 977 bp Feature: gene Location: 33276-33590 bp Feature: gene Location: 33641-33874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs

Seq: WNAB01000003.1 [Ruminococcus] torques strain BIOML-A4 scaffold3_size121239, whole genome shotgun sequence (121239 bp)
Overview 1 RT 1: 8058-10733 bp Neighborhood of RT #1 [8058, 10738] Phage_holin_5_2 RVT-DGRs Phage_XkdX Feature: gene Location: 8058-8351 bp Feature: domain Description: Phage_holin_5_2 Location: 8103-8334 bp Feature: domain Description: Phage_holin_5_2 Location: 8103 -83 3 4 bp Feature: gene Location: 8364-8687 bp Feature: gene Location: 8706-9902 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8901-9624 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8901-9624 bp Feature: gene Location: 10113-10598 bp Feature: gene Location: 10595-10738 bp Feature: domain Description: Phage_XkdX Location: 10616-10733 bp Feature: domain Description: Phage_XkdX Location: 10616-1073 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), Phage_holin_5_2 (pfam16079), RVT-DGRs

Seq: WNAB01000008.1 [Ruminococcus] torques strain BIOML-A4 scaffold8_size104107, whole genome shotgun sequence (104067 bp)
Overview 1 RT 1: 99415-103347 bp Neighborhood of RT #1 [99415, 103802] PHA00653 Avd_like RVT-DGRs Phage_holin_4_1 FlgJ Feature: gene Location: 99415-100509 bp Feature: domain Description: PHA00653 Location: 99508-100507 bp Feature: domain Description: PHA00653 Location: 99508-100507 bp Feature: gene Location: 100569-100958 bp Feature: domain Description: Avd_like Location: 100629-100932 bp Feature: domain Description: Avd_like Location: 100629-100932 bp Feature: gene Location: 101314-102354 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 101524-102139 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 101524 -102139 bp Feature: gene Location: 102426-102854 bp Feature: domain Description: Phage_holin_4_1 Location: 102480-102807 bp Feature: domain Description: Phage_holin_4 _1 Location: 1024 80-102807 bp Feature: gene Location: 102858-103802 bp Feature: domain Description: FlgJ Location: 102876-103347 bp Feature: domain Description: FlgJ Location: 102876-10334 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105), FlgJ (COG1705), PHA00653 (mtd;major tropism determinant)