myRT

myRT report for GCA_009718265.1_ASM971826v1

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Seq: WNAE01000021.1 [Ruminococcus] torques strain BIOML-A1 scaffold21_size43636, whole genome shotgun sequence (43636 bp)
Overview 1 RT 1: 33381-37856 bp Neighborhood of RT #1 [33381, 37858] RVT-GII Gph PRK05755 Feature: gene Location: 33381-33560 bp Feature: gene Location: 33762-33905 bp Feature: gene Location: 33892-34347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34102-34222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 02-34222 bp Feature: gene Location: 34509-35153 bp Feature: domain Description: Gph Location: 34542-35142 bp Feature: domain Description: Gph Location: 34542-351 42 bp Feature: gene Location: 35243-37858 bp Feature: domain Description: PRK05755 Location: 35252-37856 bp Feature: domain Description: PRK05755 Location: 35252-37856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Gph (COG0546), PRK05755 (DNA polymerase I; Provisional)

Seq: WNAE01000003.1 [Ruminococcus] torques strain BIOML-A1 scaffold3_size197145, whole genome shotgun sequence (197247 bp)
Overview 1 RT 1: 99105-103037 bp Neighborhood of RT #1 [99105, 103492] PHA00653 Avd_like RVT-DGRs Phage_holin_4_1 FlgJ Feature: gene Location: 99105-100199 bp Feature: domain Description: PHA00653 Location: 99198-100197 bp Feature: domain Description: PHA00653 Location: 99198-100197 bp Feature: gene Location: 100259-100648 bp Feature: domain Description: Avd_like Location: 100319-100622 bp Feature: domain Description: Avd_like Location: 100319-10062 2 bp Feature: gene Location: 101004-102044 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 101214-101829 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1012 14-10182 9 bp Feature: gene Location: 102116-102544 bp Feature: domain Description: Phage_holin_4_1 Location: 102170-102497 bp Feature: domain Description: Phage_holin_4_1 Location: 102 170-102 497 bp Feature: gene Location: 102548-103492 bp Feature: domain Description: FlgJ Location: 102566-103037 bp Feature: domain Description: FlgJ Location: 102 566-103037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105), FlgJ (COG1705), PHA00653 (mtd;major tropism determinant)

Seq: WNAE01000042.1 [Ruminococcus] torques strain BIOML-A1 scaffold42_size10637, whole genome shotgun sequence (10637 bp)
Overview 1 RT 1: 588-4196 bp Neighborhood of RT #1 [588, 4196] PHA00653 PHA00653 Avd_like RVT-DGRs Feature: gene Location: 588-1688 bp Feature: domain Description: PHA00653 Location: 711-1167 bp Feature: domain Description: PHA00653 Location: 711-1167 bp Feature: domain Description: PHA00653 Location: 1206-1686 bp Feature: domain Description: PHA00653 Location: 1206-1686 bp Feature: gene Location: 1742-2140 bp Feature: domain Description: Avd_like Location: 1799-2096 bp Feature: domain Description: Avd_like Location: 1799-2096 bp Feature: gene Location: 2474-3526 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2684-3299 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2684-3 299 bp Feature: gene Location: 3598-3912 bp Feature: gene Location: 3963-4196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, PHA00653 (mtd;major tropism determinant)

Seq: WNAE01000005.1 [Ruminococcus] torques strain BIOML-A1 scaffold5_size193930, whole genome shotgun sequence (193930 bp)
Overview 1 RT 1: 168000-171871 bp Neighborhood of RT #1 [168000, 171942] DnaD RVT-DGRs HTH_36 Feature: gene Location: 168000-168131 bp Feature: gene Location: 168240-168746 bp Feature: domain Description: DnaD Location: 168330-168660 bp Feature: domain Description: DnaD Location: 168330-168660 bp Feature: gene Location: 168790-169860 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 169030-169633 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 169030-169633 bp Feature: gene Location: 170382-171059 bp Feature: gene Location: 171649-171942 bp Feature: domain Description: HTH_36 Location: 171703-171871 bp Feature: domain Description: HTH_36 Location: 171703-171871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaD (COG3935), RVT-DGRs, HTH_36 (pfam13730)