myRT

myRT report for GCA_009718405.1_ASM971840v1

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Seq: WNAK01000021.1 Roseburia faecis strain BIOML-A2 scaffold21_size74584, whole genome shotgun sequence (74584 bp)
Overview 1 RT 1: 13239-18130 bp Neighborhood of RT #1 [13239, 18135] RVT-GII GIIM PBP1_BmpA_Med_like Tar Feature: gene Location: 13239-13442 bp Feature: gene Location: 13758-14012 bp Feature: gene Location: 14070-14990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14076-14541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4076-1 4541 bp Feature: domain Description: GIIM Note: maturase Location: 14595-14814 bp Feature: domain Description: GIIM Note: maturase Location: 1 4595-1 481 4 bp Feature: gene Location: 15244-16425 bp Feature: domain Description: PBP1_BmpA_Med_like Location: 15436-16213 bp Feature: domain Description: PBP1 _BmpA_Med_like Location: 1 5436-1 621 3 bp Feature: gene Location: 16435-18135 bp Feature: domain Description: Tar Location: 16924-18130 bp Feature: domain Description: Tar Location: 1 6924-1 81 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PBP1_BmpA_Med_like, Tar (COG0840)

Seq: WNAK01000023.1 Roseburia faecis strain BIOML-A2 scaffold23_size64280, whole genome shotgun sequence (64280 bp)
Overview 1 RT 1: 14-8344 bp Neighborhood of RT #1 [14, 8355] RVT-GII GIIM KOG0399 GOGAT_sm_gam Feature: gene Location: 14-151 bp Feature: gene Location: 507-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-132 6 bp Feature: domain Description: GIIM Note: maturase Location: 1380-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1380-1596 bp Feature: gene Location: 2264-6847 bp Feature: domain Description: KOG0399 Location: 2282-6827 bp Feature: domain Description: KOG0399 Location: 2 2 82 -682 7 bp Feature: gene Location: 6862-8355 bp Feature: domain Description: GOGAT_sm_gam Location: 6871-8344 bp Feature: domain Description: GOGAT_sm_gam Location: 6871-8344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0399 (KOG0399, Glutamate synthase ), RVT-GII, GIIM (pfam08388)

Seq: WNAK01000046.1 Roseburia faecis strain BIOML-A2 scaffold46_size16051, whole genome shotgun sequence (16051 bp)
Overview 1 RT 1: 1-6133 bp 2 RT 2: 10783-14133 bp Neighborhood of RT #1 [1, 6147] RVT-GII GIIM AAA-ATPase_like PDDEXK_9 Neighborhood of RT #2 [10783, 16049] AAA-ATPase_like PDDEXK_9 RVT-GII Big_2 Feature: gene Location: 1-2013 bp Feature: gene Location: 2516-3910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2834-3458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283 4-3 458 bp Feature: domain Description: GIIM Note: maturase Location: 3515-3719 bp Feature: domain Description: GIIM Note: maturase Location: 3 515-3 719 bp Feature: gene Location: 4149-4307 bp Feature: gene Location: 4420-6147 bp Feature: domain Description: AAA-ATPase_like Location: 4468-5356 bp Feature: domain Description: AAA-ATPase_like Location: 4468-53 56 bp Feature: domain Description: PDDEXK_9 Location: 5830-6133 bp Feature: domain Description: PDDEXK_9 Location: 583 0-613 3 bp Feature: gene Location: 10783-10917 bp Feature: gene Location: 10990-12693 bp Feature: domain Description: AAA-ATPase_like Location: 11014-11902 bp Feature: domain Description: AAA-ATPase_like Location: 11014-11902 bp Feature: domain Description: PDDEXK_9 Location: 12376-12682 bp Feature: domain Description: PDDEXK_9 Location: 123 76-12682 bp Feature: gene Location: 12928-13539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13186-13528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 186-13 528 bp Feature: gene Location: 13818-16049 bp Feature: domain Description: Big_2 Location: 13917-14133 bp Feature: domain Description: Big_2 Location: 13 917-1413 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), Big_2 (pfam02368)

Seq: WNAK01000061.1 Roseburia faecis strain BIOML-A2 scaffold61_size11445, whole genome shotgun sequence (11445 bp)
Overview 1 RT 1: 1972-7006 bp Neighborhood of RT #1 [1972, 7095] Aes Rick_17kDa_Anti RVT-GII GIIM FtsX FtsX Feature: gene Location: 1972-2955 bp Feature: domain Description: Aes Location: 2140-2887 bp Feature: domain Description: Aes Location: 214 0-2887 bp Feature: gene Location: 3192-3362 bp Feature: domain Description: Rick_17kDa_Anti Location: 3243-3336 bp Feature: domain Description: Rick_17kDa_Anti Location: 324 3-3336 bp Feature: gene Location: 3472-4770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3727-4420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3727-4 4 20 bp Feature: domain Description: GIIM Note: maturase Location: 4480-4699 bp Feature: domain Description: GIIM Note: maturase Location: 4 4 80-4 699 bp Feature: gene Location: 4891-5115 bp Feature: gene Location: 5323-7095 bp Feature: domain Description: FtsX Location: 5578-5836 bp Feature: domain Description: FtsX Location: 5578-5836 bp Feature: domain Description: FtsX Location: 6802-7006 bp Feature: domain Description: FtsX Location: 6802-7006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Aes (COG0657), Rick_17kDa_Anti (pfam05433), RVT-GII, GIIM (pfam08388), FtsX (pfam02687)

Seq: WNAK01000088.1 Roseburia faecis strain BIOML-A2 scaffold88_size3824, whole genome shotgun sequence (3824 bp)
Overview 1 RT 1: 2-2041 bp Neighborhood of RT #1 [2, 2041] RVT-GII RpoE Feature: gene Location: 2-127 bp Feature: gene Location: 219-611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 510-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 10-5 88 bp Feature: gene Location: 733-1278 bp Feature: domain Description: RpoE Location: 781-1264 bp Feature: domain Description: RpoE Location: 781-1264 bp Feature: gene Location: 1265-2041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RpoE (COG3343)

Seq: WNAK01000090.1 Roseburia faecis strain BIOML-A2 scaffold90_size1876, whole genome shotgun sequence (1876 bp)
Overview 1 RT 1: 155-1435 bp Neighborhood of RT #1 [155, 1785] RVT-GII Feature: gene Location: 155-400 bp Feature: gene Location: 490-1785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 745-1435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII