myRT

myRT report for GCA_009719285.1_ASM971928v1

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Seq: WNCD01000093.1 Parasutterella excrementihominis strain BIOML-A10 scaffold103_size5603, whole genome shotgun sequence (5603 bp)
Overview 1 RT 1: 54-4884 bp Neighborhood of RT #1 [54, 4889] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 54-524 bp Feature: domain Description: Bac_Flav_CT_G Location: 120-501 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 20-501 bp Feature: gene Location: 577-2277 bp Feature: RT Description: RVT_N Location: 676-919 bp Feature: RT Description: RVT_N Location: 676-91 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1 61 2 bp Feature: domain Description: GIIM Note: maturase Location: 1663-1897 bp Feature: domain Description: GIIM Note: maturase Location: 1 663-1 897 bp Feature: gene Location: 2457-2663 bp Feature: gene Location: 2856-4889 bp Feature: domain Description: Bac_Flav_CT_G Location: 2859-4884 bp Feature: domain Description: Bac_Flav_CT_G Location: 2859-4884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WNCD01000011.1 Parasutterella excrementihominis strain BIOML-A10 scaffold11_size78752, whole genome shotgun sequence (78752 bp)
Overview 1 RT 1: 106-2275 bp Neighborhood of RT #1 [106, 2275] RVT-GII GIIM Feature: gene Location: 106-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1330 bp Feature: domain Description: GIIM Note: maturase Location: 112 0-1330 bp Feature: gene Location: 1727-1897 bp Feature: gene Location: 2135-2275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCD01000014.1 Parasutterella excrementihominis strain BIOML-A10 scaffold14_size59880, whole genome shotgun sequence (59880 bp)
Overview 1 RT 1: 22975-29221 bp Neighborhood of RT #1 [22975, 29226] cysS RVT-GII GIIM M20_Acy1_IAAspH DcuC Feature: gene Location: 22975-24369 bp Feature: domain Description: cysS Location: 22978-24364 bp Feature: domain Description: cysS Location: 22978-243 64 bp Feature: gene Location: 24601-24807 bp Feature: gene Location: 24933-26216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25167-25785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25167-25785 bp Feature: domain Description: GIIM Note: maturase Location: 25833-26061 bp Feature: domain Description: GIIM Note: maturase Location: 2583 3 -26061 bp Feature: gene Location: 26426-27718 bp Feature: domain Description: M20_Acy1_IAAspH Location: 26459-27689 bp Feature: domain Description: M20_Acy1_IAAspH Location: 26459-27689 bp Feature: gene Location: 27967-29226 bp Feature: domain Description: DcuC Location: 27994-29221 bp Feature: domain Description: DcuC Location: 27994-29221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysS (TIGR00435), RVT-GII, GIIM (pfam08388), M20_Acy1_IAAspH (cd05665), DcuC (TIGR00771)

Seq: WNCD01000050.1 Parasutterella excrementihominis strain BIOML-A10 scaffold50_size13749, whole genome shotgun sequence (13749 bp)
Overview 1 RT 1: 60-4506 bp Neighborhood of RT #1 [60, 4856] AAA_23 RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD AAA_15 TOPRIM_OLD Feature: gene Location: 60-446 bp Feature: domain Description: AAA_23 Location: 198-417 bp Feature: domain Description: AAA_23 Location: 198-4 17 bp Feature: gene Location: 448-1374 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 550-1141 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 550-114 1 bp Feature: gene Location: 1697-3214 bp Feature: domain Description: DEXQc_UvrD Location: 1730-1949 bp Feature: domain Description: DEXQc_UvrD Location: 1730-194 9 bp Feature: domain Description: DEXQc_UvrD Location: 1985-2198 bp Feature: domain Description: DEXQc_UvrD Location: 1985-2198 bp Feature: domain Description: UvrD Location: 2675-3173 bp Feature: domain Description: UvrD Location: 2675-3173 bp Feature: gene Location: 3207-4856 bp Feature: domain Description: AAA_15 Location: 3216-4149 bp Feature: domain Description: AAA_15 Location: 3216-4 14 9 bp Feature: domain Description: TOPRIM_OLD Location: 4272-4506 bp Feature: domain Description: TOPRIM_OLD Location: 4 272-4 506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, AAA_23 (pfam13476)

Seq: WNCD01000168.1 Parasutterella excrementihominis strain BIOML-A10 scaffold544_size1910, whole genome shotgun sequence (1910 bp)
Overview 1 RT 1: 106-1908 bp Neighborhood of RT #1 [106, 1908] RVT-GII GIIM Feature: gene Location: 106-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-105 7 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1339 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1339 bp Feature: gene Location: 1750-1908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCD01000170.1 Parasutterella excrementihominis strain BIOML-A10 scaffold553_size1884, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 63-1230 bp Neighborhood of RT #1 [63, 1394] RVT-GII GIIM Feature: gene Location: 63-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCD01000081.1 Parasutterella excrementihominis strain BIOML-A10 scaffold82_size8941, whole genome shotgun sequence (8941 bp)
Overview 1 RT 1: 1-5825 bp Neighborhood of RT #1 [1, 5825] RVT-GII GIIM COG4870 autotrns_rpt Autotransporter Feature: gene Location: 1-240 bp Feature: gene Location: 412-1803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 39-1363 bp Feature: domain Description: GIIM Note: maturase Location: 1426-1636 bp Feature: domain Description: GIIM Note: maturase Location: 1426-1636 bp Feature: gene Location: 2572-5196 bp Feature: domain Description: COG4870 Location: 2650-3001 bp Feature: domain Description: COG487 0 Location: 2650-3001 bp Feature: domain Description: autotrns_rpt Location: 3550-3631 bp Feature: domain Description: autotrns_rpt Location: 3550-3631 bp Feature: domain Description: Autotransporter Location: 4366-5131 bp Feature: domain Description: Autotransporter Location: 4366-5131 bp Feature: gene Location: 5286-5825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4870 (Cysteine protease, C1A family ), autotrns_rpt (TIGR02601), Autotransporter (smart00869), RVT-GII, GIIM (pfam08388)