myRT

myRT report for GCA_009719325.1_ASM971932v1

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Seq: WNCE01000013.1 Parasutterella excrementihominis strain BIOML-A9 scaffold13_size59879, whole genome shotgun sequence (59879 bp)
Overview 1 RT 1: 22974-29220 bp Neighborhood of RT #1 [22974, 29225] cysS RVT-GII GIIM M20_Acy1_IAAspH DcuC Feature: gene Location: 22974-24368 bp Feature: domain Description: cysS Location: 22977-24363 bp Feature: domain Description: cysS Location: 22977-24363 bp Feature: gene Location: 24600-24806 bp Feature: gene Location: 24932-26215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25166-25784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 66-25784 bp Feature: domain Description: GIIM Note: maturase Location: 25832-26060 bp Feature: domain Description: GIIM Note: maturase Location: 25832-26060 bp Feature: gene Location: 26425-27717 bp Feature: domain Description: M20_Acy1_IAAspH Location: 26458-27688 bp Feature: domain Description: M20_Acy1 _IAAspH Location: 26458-27688 bp Feature: gene Location: 27966-29225 bp Feature: domain Description: DcuC Location: 27993-29220 bp Feature: domain Description: DcuC Location: 27993-29220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysS (TIGR00435), RVT-GII, GIIM (pfam08388), M20_Acy1_IAAspH (cd05665), DcuC (TIGR00771)

Seq: WNCE01000107.1 Parasutterella excrementihominis strain BIOML-A9 scaffold168_size1909, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 106-1906 bp Neighborhood of RT #1 [106, 1906] RVT-GII GIIM Feature: gene Location: 106-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1330 bp Feature: domain Description: GIIM Note: maturase Location: 112 0-1330 bp Feature: gene Location: 1727-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCE01000109.1 Parasutterella excrementihominis strain BIOML-A9 scaffold174_size1884, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 63-1230 bp Neighborhood of RT #1 [63, 1394] RVT-GII GIIM Feature: gene Location: 63-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Feature: domain Description: GIIM Note: maturase Location: 999-123 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCE01000019.1 Parasutterella excrementihominis strain BIOML-A9 scaffold19_size53377, whole genome shotgun sequence (54604 bp)
Overview 1 RT 1: 3-4054 bp Neighborhood of RT #1 [3, 4056] RVT-GII GIIM GIIM CdsB Feature: gene Location: 3-242 bp Feature: gene Location: 414-1805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741-1365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 1-1365 bp Feature: domain Description: GIIM Note: maturase Location: 1428-1647 bp Feature: domain Description: GIIM Note: maturase Location: 14 28-164 7 bp Feature: gene Location: 1839-2069 bp Feature: domain Description: GIIM Note: maturase Location: 1923-2067 bp Feature: domain Description: GIIM Note: maturase Location: 1923-2067 bp Feature: gene Location: 2770-4056 bp Feature: domain Description: CdsB Location: 2791-4054 bp Feature: domain Description: CdsB Location: 2791-4 054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), CdsB (COG3681), RVT-GII

Seq: WNCE01000030.1 Parasutterella excrementihominis strain BIOML-A9 scaffold30_size35245, whole genome shotgun sequence (35245 bp)
Overview 1 RT 1: 27896-31821 bp Neighborhood of RT #1 [27896, 31892] DUF3597 RVT-GII GIIM frdB Feature: gene Location: 27896-28027 bp Feature: gene Location: 28031-28471 bp Feature: domain Description: DUF3597 Location: 28040-28457 bp Feature: domain Description: DUF35 97 Location: 28040-2845 7 bp Feature: gene Location: 28883-30274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29210-29834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29210-29834 bp Feature: domain Description: GIIM Note: maturase Location: 29897-30107 bp Feature: domain Description: GIIM Note: maturase Location: 29897-30107 bp Feature: gene Location: 30446-30673 bp Feature: gene Location: 31038-31892 bp Feature: domain Description: frdB Location: 31116-31821 bp Feature: domain Description: frdB Location: 31116-31821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3597 (pfam12200), RVT-GII, GIIM (pfam08388), frdB (PRK13552)

Seq: WNCE01000052.1 Parasutterella excrementihominis strain BIOML-A9 scaffold53_size13807, whole genome shotgun sequence (13807 bp)
Overview 1 RT 1: 69-4564 bp Neighborhood of RT #1 [69, 4914] AAA_23 RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD AAA_15 TOPRIM_OLD Feature: gene Location: 69-455 bp Feature: domain Description: AAA_23 Location: 207-426 bp Feature: domain Description: AAA_23 Location: 207-426 bp Feature: gene Location: 457-1383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559-1150 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559-1150 bp Feature: gene Location: 1755-3272 bp Feature: domain Description: DEXQc_UvrD Location: 1788-2007 bp Feature: domain Description: DEXQc_UvrD Location: 1788-2007 bp Feature: domain Description: DEXQc_UvrD Location: 2043-2256 bp Feature: domain Description: DEXQc_UvrD Location: 2043-2256 bp Feature: domain Description: UvrD Location: 2733-3231 bp Feature: domain Description: UvrD Location: 2733-3231 bp Feature: gene Location: 3265-4914 bp Feature: domain Description: AAA_15 Location: 3274-4207 bp Feature: domain Description: AAA_15 Location: 3274-4207 bp Feature: domain Description: TOPRIM_OLD Location: 4330-4564 bp Feature: domain Description: TOPRIM_OLD Location: 4330-456 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, AAA_23 (pfam13476)

Seq: WNCE01000084.1 Parasutterella excrementihominis strain BIOML-A9 scaffold85_size5603, whole genome shotgun sequence (5603 bp)
Overview 1 RT 1: 54-4884 bp Neighborhood of RT #1 [54, 4889] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 54-524 bp Feature: domain Description: Bac_Flav_CT_G Location: 120-501 bp Feature: domain Description: Bac_Flav_CT_G Location: 120-501 bp Feature: gene Location: 577-2277 bp Feature: RT Description: RVT_N Location: 676-919 bp Feature: RT Description: RVT_N Location: 67 6-919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1612 bp Feature: domain Description: GIIM Note: maturase Location: 1663-1897 bp Feature: domain Description: GIIM Note: maturase Location: 1663-1897 bp Feature: gene Location: 2457-2663 bp Feature: gene Location: 2856-4889 bp Feature: domain Description: Bac_Flav_CT_G Location: 2859-4884 bp Feature: domain Description: Bac_Flav_CT_G Location: 2859-4884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)