myRT

myRT report for GCA_009719355.1_ASM971935v1

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Seq: WNCC01000100.1 Parasutterella excrementihominis strain BIOML-A11 scaffold100_size1910, whole genome shotgun sequence (1910 bp)
Overview 1 RT 1: 106-1908 bp Neighborhood of RT #1 [106, 1908] RVT-GII GIIM Feature: gene Location: 106-1497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433-1 057 bp Feature: domain Description: GIIM Note: maturase Location: 1120-1339 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 20-1 339 bp Feature: gene Location: 1750-1908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCC01000101.1 Parasutterella excrementihominis strain BIOML-A11 scaffold101_size1909, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 1-1636 bp Neighborhood of RT #1 [1, 1803] RVT-GII GIIM Feature: gene Location: 1-240 bp Feature: gene Location: 412-1803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1363 bp Feature: domain Description: GIIM Note: maturase Location: 1426-1636 bp Feature: domain Description: GIIM Note: maturase Location: 142 6-1636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCC01000102.1 Parasutterella excrementihominis strain BIOML-A11 scaffold102_size1884, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 63-1230 bp Neighborhood of RT #1 [63, 1394] RVT-GII GIIM Feature: gene Location: 63-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Feature: domain Description: GIIM Note: maturase Location: 999-123 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCC01000013.1 Parasutterella excrementihominis strain BIOML-A11 scaffold13_size59880, whole genome shotgun sequence (59880 bp)
Overview 1 RT 1: 22975-29221 bp Neighborhood of RT #1 [22975, 29226] cysS RVT-GII GIIM M20_Acy1_IAAspH DcuC Feature: gene Location: 22975-24369 bp Feature: domain Description: cysS Location: 22978-24364 bp Feature: domain Description: cysS Location: 22978-24 364 bp Feature: gene Location: 24601-24807 bp Feature: gene Location: 24933-26216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25167-25785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25167-25785 bp Feature: domain Description: GIIM Note: maturase Location: 25833-26061 bp Feature: domain Description: GIIM Note: maturase Location: 25833-26061 bp Feature: gene Location: 26426-27718 bp Feature: domain Description: M20_Acy1_IAAspH Location: 26459-27689 bp Feature: domain Description: M20_Acy1_IAAspH Location: 264 59-27689 bp Feature: gene Location: 27967-29226 bp Feature: domain Description: DcuC Location: 27994-29221 bp Feature: domain Description: DcuC Location: 27994 -29221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysS (TIGR00435), RVT-GII, GIIM (pfam08388), M20_Acy1_IAAspH (cd05665), DcuC (TIGR00771)

Seq: WNCC01000052.1 Parasutterella excrementihominis strain BIOML-A11 scaffold52_size13807, whole genome shotgun sequence (13807 bp)
Overview 1 RT 1: 69-4564 bp Neighborhood of RT #1 [69, 4914] AAA_23 RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD AAA_15 TOPRIM_OLD Feature: gene Location: 69-455 bp Feature: domain Description: AAA_23 Location: 207-426 bp Feature: domain Description: AAA_23 Location: 207-426 bp Feature: gene Location: 457-1383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 559-1150 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5 5 9-115 0 bp Feature: gene Location: 1755-3272 bp Feature: domain Description: DEXQc_UvrD Location: 1788-2007 bp Feature: domain Description: DEXQc_UvrD Location: 1788-2007 bp Feature: domain Description: DEXQc_UvrD Location: 2043-2256 bp Feature: domain Description: DEXQc_UvrD Location: 2043-225 6 bp Feature: domain Description: UvrD Location: 2733-3231 bp Feature: domain Description: UvrD Location: 2733-3231 bp Feature: gene Location: 3265-4914 bp Feature: domain Description: AAA_15 Location: 3274-4207 bp Feature: domain Description: AAA_15 Location: 3274-4207 bp Feature: domain Description: TOPRIM_OLD Location: 4330-4564 bp Feature: domain Description: TOPRIM_OLD Location: 4330-45 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, AAA_23 (pfam13476)

Seq: WNCC01000079.1 Parasutterella excrementihominis strain BIOML-A11 scaffold79_size5603, whole genome shotgun sequence (5603 bp)
Overview 1 RT 1: 54-4884 bp Neighborhood of RT #1 [54, 4889] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 54-524 bp Feature: domain Description: Bac_Flav_CT_G Location: 120-501 bp Feature: domain Description: Bac_Flav_CT_G Location: 120-501 bp Feature: gene Location: 577-2277 bp Feature: RT Description: RVT_N Location: 676-919 bp Feature: RT Description: RVT_N Location: 6 76 -919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96 4-16 12 bp Feature: domain Description: GIIM Note: maturase Location: 1663-1897 bp Feature: domain Description: GIIM Note: maturase Location: 16 6 3-1897 bp Feature: gene Location: 2457-2663 bp Feature: gene Location: 2856-4889 bp Feature: domain Description: Bac_Flav_CT_G Location: 2859-4884 bp Feature: domain Description: Bac_Flav_CT_G Location: 2859-4884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: WNCC01000007.1 Parasutterella excrementihominis strain BIOML-A11 scaffold7_size96550, whole genome shotgun sequence (96550 bp)
Overview 1 RT 1: 91780-96547 bp Neighborhood of RT #1 [91780, 96547] PRK13553 M20_Acy1_IAAspH RVT-GII GIIM Feature: gene Location: 91780-92622 bp Feature: domain Description: PRK13553 Location: 91867-92530 bp Feature: domain Description: PRK13553 Location: 91867 -92530 bp Feature: gene Location: 92903-94171 bp Feature: domain Description: M20_Acy1_IAAspH Location: 92924-94151 bp Feature: domain Description: M20_Acy1_IAAspH Location: 92924-94151 bp Feature: gene Location: 94747-96138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95074-95698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9507 4-95698 bp Feature: domain Description: GIIM Note: maturase Location: 95761-95971 bp Feature: domain Description: GIIM Note: maturase Location: 957 61-9597 1 bp Feature: gene Location: 96365-96547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13553 (fumarate reductase cytochrome b subunit), M20_Acy1_IAAspH (cd05665), RVT-GII, GIIM (pfam08388)