myRT

myRT report for GCA_009719385.1_ASM971938v1

Download annotations/find similar RTs

Seq: WNCH01000108.1 Parasutterella excrementihominis strain BIOML-A6 scaffold108_size1910, whole genome shotgun sequence (1910 bp)
Overview 1 RT 1: 3-1647 bp Neighborhood of RT #1 [3, 1805] RVT-GII GIIM Feature: gene Location: 3-242 bp Feature: gene Location: 414-1805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741-1365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741 -1 365 bp Feature: domain Description: GIIM Note: maturase Location: 1428-1647 bp Feature: domain Description: GIIM Note: maturase Location: 1 428-1 647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCH01000109.1 Parasutterella excrementihominis strain BIOML-A6 scaffold109_size1909, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 107-1906 bp Neighborhood of RT #1 [107, 1906] RVT-GII GIIM Feature: gene Location: 107-1498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-1058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-1058 bp Feature: domain Description: GIIM Note: maturase Location: 1121-1331 bp Feature: domain Description: GIIM Note: maturase Location: 112 1-1331 bp Feature: gene Location: 1670-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCH01000110.1 Parasutterella excrementihominis strain BIOML-A6 scaffold110_size1884, whole genome shotgun sequence (1884 bp)
Overview 1 RT 1: 63-1230 bp Neighborhood of RT #1 [63, 1394] RVT-GII GIIM Feature: gene Location: 63-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-912 bp Feature: domain Description: GIIM Note: maturase Location: 999-1230 bp Feature: domain Description: GIIM Note: maturase Location: 999-123 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WNCH01000012.1 Parasutterella excrementihominis strain BIOML-A6 scaffold12_size59879, whole genome shotgun sequence (59879 bp)
Overview 1 RT 1: 22974-29220 bp Neighborhood of RT #1 [22974, 29225] cysS RVT-GII GIIM M20_Acy1_IAAspH DcuC Feature: gene Location: 22974-24368 bp Feature: domain Description: cysS Location: 22977-24363 bp Feature: domain Description: cysS Location: 22977-24 363 bp Feature: gene Location: 24600-24806 bp Feature: gene Location: 24932-26215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25166-25784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25166-25784 bp Feature: domain Description: GIIM Note: maturase Location: 25832-26060 bp Feature: domain Description: GIIM Note: maturase Location: 25832-26060 bp Feature: gene Location: 26425-27717 bp Feature: domain Description: M20_Acy1_IAAspH Location: 26458-27688 bp Feature: domain Description: M20_Acy1_IAAspH Location: 264 58-27688 bp Feature: gene Location: 27966-29225 bp Feature: domain Description: DcuC Location: 27993-29220 bp Feature: domain Description: DcuC Location: 27993-29220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysS (TIGR00435), RVT-GII, GIIM (pfam08388), M20_Acy1_IAAspH (cd05665), DcuC (TIGR00771)

Seq: WNCH01000063.1 Parasutterella excrementihominis strain BIOML-A6 scaffold63_size11744, whole genome shotgun sequence (11744 bp)
Overview 1 RT 1: 61-4556 bp Neighborhood of RT #1 [61, 4906] AAA_23 RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD AAA_15 TOPRIM_OLD Feature: gene Location: 61-447 bp Feature: domain Description: AAA_23 Location: 199-418 bp Feature: domain Description: AAA_23 Location: 199-418 bp Feature: gene Location: 449-1375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 551-1142 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5 5 1-1142 bp Feature: gene Location: 1747-3264 bp Feature: domain Description: DEXQc_UvrD Location: 1780-1999 bp Feature: domain Description: DEXQc_UvrD Location: 1780-1999 bp Feature: domain Description: DEXQc_UvrD Location: 2035-2248 bp Feature: domain Description: DEXQc_UvrD Location: 2035 -2248 bp Feature: domain Description: UvrD Location: 2725-3223 bp Feature: domain Description: UvrD Location: 2725 -3223 bp Feature: gene Location: 3257-4906 bp Feature: domain Description: AAA_15 Location: 3266-4199 bp Feature: domain Description: AAA_15 Location: 3266-4199 bp Feature: domain Description: TOPRIM_OLD Location: 4322-4556 bp Feature: domain Description: TOPRIM_OLD Location: 4322-45 5 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), UvrD (COG0210), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-Retrons, AAA_23 (pfam13476)

Seq: WNCH01000007.1 Parasutterella excrementihominis strain BIOML-A6 scaffold7_size96381, whole genome shotgun sequence (96381 bp)
Overview 1 RT 1: 91781-96378 bp Neighborhood of RT #1 [91781, 96378] PRK13553 M20_Acy1_IAAspH RVT-GII GIIM Feature: gene Location: 91781-92623 bp Feature: domain Description: PRK13553 Location: 91868-92531 bp Feature: domain Description: PRK13553 Location: 9186 8-92531 bp Feature: gene Location: 92904-94172 bp Feature: domain Description: M20_Acy1_IAAspH Location: 92925-94152 bp Feature: domain Description: M20_Acy1_IAAspH Location: 92925-94152 bp Feature: gene Location: 94578-95969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94905-95529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94905-95529 bp Feature: domain Description: GIIM Note: maturase Location: 95592-95802 bp Feature: domain Description: GIIM Note: maturase Location: 95592-95802 bp Feature: gene Location: 96196-96378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13553 (fumarate reductase cytochrome b subunit), M20_Acy1_IAAspH (cd05665), RVT-GII, GIIM (pfam08388)

Seq: WNCH01000085.1 Parasutterella excrementihominis strain BIOML-A6 scaffold85_size5604, whole genome shotgun sequence (5604 bp)
Overview 1 RT 1: 54-4885 bp Neighborhood of RT #1 [54, 4890] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 54-575 bp Feature: domain Description: Bac_Flav_CT_G Location: 171-552 bp Feature: domain Description: Bac_Flav_CT_G Location: 17 1-552 bp Feature: gene Location: 578-2278 bp Feature: RT Description: RVT_N Location: 677-920 bp Feature: RT Description: RVT_N Location: 67 7 -920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1613 bp Feature: domain Description: GIIM Note: maturase Location: 1664-1898 bp Feature: domain Description: GIIM Note: maturase Location: 1664-1898 bp Feature: gene Location: 2458-2664 bp Feature: gene Location: 2857-4890 bp Feature: domain Description: Bac_Flav_CT_G Location: 2860-4885 bp Feature: domain Description: Bac_Flav_CT_G Location: 2860-4885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)